| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 16 [0] | [1] 17 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 16 (1.760) | 13/298 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | ethanolamine ammonia‑lyase reactivase EutA | |||||
GCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCG > NC_000913/2565262‑2565695 | catcttcataggcaatcaacggattattgcggatgtccgatacggtcatttccgacaaaacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcaccgtc > 1:183497‑M2/228‑250 (MQ=255) tcataggcaatcaccggattattgcggatgtccgctccggtcatttccgacaactcctgcttcgccgccacgcgctcctgtgatcttgcctctgcgacccccgccagcacatcccccgaacgcagttctttggctttagccagcacctcttttacatccttaaactgatatacattgcctaacaatgtggtctttagtttcataagtctttccctcaggaagGAAATGCGAGTGATttcaccgtcacn < 1:26570‑M2/26‑2 (MQ=255) gcaacccccggattagtgcgtaggtcctctacggtcattcccgacaccccctgctttgccgccacgcgctcctgtgagcttgccgcggcgagccccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataaggcgttccctcatgaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAcc < 1:153839‑M2/35‑1 (MQ=255) cgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAAt > 1:61466‑M2/191‑251 (MQ=255) acaccccctgcttggcctccacgcgctccggtggccttgccgttacgccgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccgtaaactgatagacattgccgaacaatgtggtctgtagtttcataagtcgttccctcaggaagGAAATGCGAGTGAGTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCcg < 1:104144‑M2/78‑1 (MQ=255) cctggctttgccgccacgcccccctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCgg < 1:61998‑M2/83‑1 (MQ=255) cccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcagaagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGGCACCTGCACATGCGATCCGCCAAAAAGAGGCGTAc < 1:184128‑M2/57‑1 (MQ=255) cccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttaaatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCAACGGCACAACCGCTCCGCCAAAAAGAGGCGTACCAATGACGCTATAGTCCCCCGCGCGGACAATAACTTCGTCAATGACTGCAAACGGGCGTTGTTGTAGCtgt > 1:138172‑M2/124‑251 (MQ=255) acgcagttcgtgggctttagacagctcctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATTCGAGTGATTTCACCGTCACCGGCTCAACCGCTCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCTCTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCag < 1:38058‑M2/148‑1 (MQ=255) gctttagccagcacctcttttacatccttaaactgatatacattgccgaaccatgaggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACAGATCCGCCAAAAAGAGGCGTACATATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGCAGCTGTGGGCGCAACAACATGCCAAGAGCTTTACCaa > 1:218875‑M2/91‑249 (MQ=255) gctttagcaagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCaa > 1:50353‑M2/91‑249 (MQ=255) cagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCcgcgcg < 1:58050‑M2/82‑1 (MQ=255) cttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACtt < 1:75003‑M2/93‑1 (MQ=255) ccgaacaaggtggtctttagtttcataagtcgttccctcatgaagTAAATGCGAGTGATTTCACCGTCACCGTCACAACCGAGCCGCCAAAAAGAGGCGTGCCAATGTCGAGATAGTCCCCCGCGCGGACAATCACTGCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAAcgc < 1:163630‑M2/206‑1 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCCCCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAacgcn < 1:132052‑M2/207‑2 (MQ=255) gtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATnactnnnnncgnnnnnnnnnn > 2:132052‑M2/34‑144 (MQ=255) nggnaATNCNNGNNATTNCACCGTCACCGGCACAACCGANNCGCCAAAAANAGGCGTACCAATGTCGATATAGTCCCCCTCGCGTACAATCACTTCGTCAATGANTGCCAACGGNNGTNGTTGTNGNNNTNNNCGNAACAACATGCCCAGAGCTTNACNNAAGTCCNGCCCGGCCACCGCCAGCAGGGGATGc < 2:50353/192‑1 (MQ=255) | GCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACAACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCG > NC_000913/2565262‑2565695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |