Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,792,772 IS2 (–) +5 bp intergenic (‑41/+33) nlpC ← / ← btuD NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1469240NA (NA)8 (0.850) 6/310 0.3 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 1792772 = 0 (0.000)intergenic (‑41/+37) nlpC/btuD NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit
* ? NC_000913 = 1651548NA (NA)11 (1.150) 7/314 0.2 100% noncoding (706/706 nt) IS2 repeat region
?NC_000913 = 1792776 0 (0.000)intergenic (‑45/+33) nlpC/btuD NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit

GGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCTGGAAAAATTTGGTGAGGCCCGACAAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCAACACATACCGTGCCGTCATCAAAAATATCC  >  NC_000913/1651389‑1651761
                                                                                                                                                               |                                                                                                                                                                                                                     
ngTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGa                                                                                                                                                                                                                >  1:53950/2‑167 (MQ=18)
           gcaAAGAACCTTGCAGAGGCGTTCGAGAATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCTGGAAAAATTTGGTGAgg                                                                                                                 >  1:60704/1‑251 (MQ=255)
                        cAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCGCACGCAATCTGGAAAAATTTGGTGAGGCCCGACAAGAttt                                                                                                    <  1:105166/251‑1 (MQ=255)
                                                                                 cgcCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTCAGTGATAACAGATGCCTGGAAATATACGGGCAAATCCACAGGAGAACTACGCTCCTCTGTTTGTTACGCAATCAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCTCTCCTCACGCAATCTGGAAAAATTTGGTGAGGCCCGACAAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCa                                            >  1:216673/1‑250 (MQ=255)
                                                                                   cctcGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGAGATAACAGATGTCTAGAAATATAGGGGCAAATCCACAGGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCCAAACAGTTTCCCTCGTCACGCAATCTgg                                                                                                                                <  1:169291/161‑1 (MQ=37)
                                                                                    cACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGGGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGAACTACGCGCCTCGGGTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTcc                                                                                                                                                 <  1:105647/146‑1 (MQ=25)
                                                                                                 gCGGCAGCGGGCTTTTAATGGGTTAAGTGATAACAGATGTCTGGAAAGATAGGGGCAAATCCACAGGTTAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTTCCTCCTCACGCAATCTGGAAAAATTTTGTGAGGCTCTACAAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCaan                              <  1:19700/248‑2 (MQ=39)
                                                                                                       gCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGCGAACTACGCTCCTCTGTTTGTTAAGCACTAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCTGGAAAAATTTGGTGAGGCCCGACCAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCAACACATACCgg                     >  1:145430/1‑250 (MQ=255)
                                                                                                           gCTTGTAATGGGTTTAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCTGGAAAAATTTGGTGAGGCCCGACAAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCAACACATACCGTGccn                 <  1:43434/251‑2 (MQ=255)
                                                                                                                     ggTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCGGGAAAAATTTGGTGAGGCCCGACAAGATTTAACCATAAAAGAACTGGCTGAAAAAtttn                                                                       <  1:21664/187‑2 (MQ=255)
                                                                                                                          aGTGATAACAGCTGTATGGAAATATAGGGGCAAATCCACAGGAGAACTACGCCCCTCTGTTTGTTACGCAATAAACACTGGTGCTTTAGACTATGCAAAACAGTTTCCCTCCTCCCGCAATCTGGAAAAATTTGCTGAGGCCAGACACGATTTAACAATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCAACACATACCGTGCCGTCATCAAAAATATcc  >  1:34634/1‑251 (MQ=255)
                                                                                                                                                               |                                                                                                                                                                                                                     
GGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACAGGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCTGGAAAAATTTGGTGAGGCCCGACAAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCAACACATACCGTGCCGTCATCAAAAATATCC  >  NC_000913/1651389‑1651761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.