| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,667,887 | Δ1 bp | coding (678/1221 nt) | mlc ← | DNA‑binding transcriptional repressor Mlc |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,667,887 | 0 | C | . | 100.0% | 14.1 / NA | 5 | coding (678/1221 nt) | mlc | DNA‑binding transcriptional repressor Mlc |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (2/3); total (2/3) | |||||||||||
GCAATGCCGCCTGACACAATGAGTCCACGGTTAACGGTTGTCCATGTAACATCGAGCTCATGGATTGATTAAGACGCAGCTGTGCCAGCTCAAGAATACTGTCCACGCTGGCGATGGTTTCGAGGCAGCCGTGATTCCCGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCG‑CGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAAT > NC_000913/1667649‑1668099 | gcAATGCCGCCTGACACAATGAGTCCACGGTTAACGGTTGTCCATGTAACATCGAGCTCATGGATTGAGTAAGACGCAGCTGTGCCAGCTCAAGAATACTGGCCACGCTGGCGATGGTTTCGAGGCAGCCGTGATTCCCGCAATAACAGCGTTTCCCATACGGGTCGACCTGTTTGTGGCCTATGTCCATGAGACTACTTCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCC‑GCCCCCACGTtgt < 1:198621/251‑1 (MQ=255) cACGCTGGCGATGGTTTCGAGGCAGCCGTGATTCCCGCAATAACACCCTTTCCCATCCGGGTCGACCTGTGGGGGGCCTATTTCCACGAGACTGCTGCTGCCTGCGTGTAGGAGATGACCATCTGTAATGACGCC‑GCCCCCACGTTTTGATCGATAACCACCTGAATCCCA‑CGACGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGCCCATGCGCGGATATCATGCTGAATATAAACCGGAAc < 1:1363/251‑1 (MQ=255) gCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGCCGCA‑GCCCCCCCGTTGTGCTCGATAAACAACTGAATCCCATcccg > 1:158445/1‑98 (MQ=255) gCCTATNTCCACGAGACNACTNNTGCCNGNGNGTAGCAGATGACCATCGGTAATGACGCC‑GNCCCCACGTTGTGATCGATAACCANNTGNNNCANNTcg‑cg < 2:158445/101‑1 (MQ=255) gctgcCTGCGTGTAGCAGATGACCATCGGTAATGACGCC‑GCCCCCACGTTGTGATCGATACCCACCTGAATCACATCG‑CGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGAGATGTACAATACCATTTTCCGTATCaataat > 1:123678/1‑251 (MQ=255) | GCAATGCCGCCTGACACAATGAGTCCACGGTTAACGGTTGTCCATGTAACATCGAGCTCATGGATTGATTAAGACGCAGCTGTGCCAGCTCAAGAATACTGTCCACGCTGGCGATGGTTTCGAGGCAGCCGTGATTCCCGCAATAACAGCGTTTCCCATACGGGTCGACCTGTGTGTGGCCTATTTCCACGAGACTACTGCTGCCTGCGTGTAGCAGATGACCATCGGTAATGACGCCCGCCCCCACGTTGTGATCGATAACCACCTGAATCACATCG‑CGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAAT > NC_000913/1667649‑1668099 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |