| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 724,260 | C→T | G52E (GGG→GAG) | kdpD ← | sensor histidine kinase KdpD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 724,260 | 0 | C | T | 100.0% | 41.2 / NA | 17 | G52E (GGG→GAG) | kdpD | sensor histidine kinase KdpD |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/10); total (7/10) | |||||||||||
TTGGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGACGATCGGGGTCGGGACGTAAGGGTTCGTTATTCATCAAGTTTATCCAGCGCCAGATTGAGTTCAACAATGTTGACAACCGGCTGGCCGATATATTTCACCAGCGGTTGTTGGCTGTATTTTGC > NC_000913/724047‑724502 | ttGGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCg < 1:56742/250‑1 (MQ=255) aCCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTATACCACGCCCACCACAATATCCAGCTCTTGCGCCCGCCGTCGCTGGGCTTc > 1:243474/1‑225 (MQ=255) aTCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTGTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAACTTTCAGCTTccc < 1:147858/251‑1 (MQ=255) ggcgggcgAGGGCGGCATCGAGATCAAACGCTCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCGTCCAGCATGGCGGCGGGATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATGCCCAGCTCGTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAgg < 1:114100/192‑1 (MQ=255) naGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCtac > 1:69077/2‑199 (MQ=255) gagaTCAAACTCGCTGATATGCCGCCCACGGTACGACTGGCGTTTTAACGGCAGAACAGCCAGACCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTTGGCTTCTGCCAGCATCGCCCAGGTCTTCCCTACGCCTGCACAGGCAGTGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGAc < 1:95307/251‑1 (MQ=255) gaTCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAAAAGCGAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCAAGCCAACCAAAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGACg > 1:119456/1‑250 (MQ=255) ttAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATAGCCAGCTCTTGCGCCCGCAGGCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAgg < 1:108961/150‑1 (MQ=255) cGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCTCTGGCGCCCGCAGTCTCTGGTCTTCTGCCAGCATCGCGCAGGTCTTCCCTACGCCTGCACAGGCTCCGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGACGATCgggg < 1:177702/211‑1 (MQ=255) gCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGGATCTTTTCGCCCGTGTTTTTCTACCACGCCAGCCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATc < 1:107204/116‑1 (MQ=255) gccagccCTTCCAGCATGGCGGCTGTATCTTTTCGCCCGGGGGTTTCTACCACGCCAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCGTCCCGACGCCTGCACAGGCTCCGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCATTTTTTTCCATCAGACGATCGGGGTCGGGACGTAAg < 1:106133/213‑1 (MQ=255) acagccCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCAAACCACAATATCCAGCTCTTGCGCCCGAAGTCGCTGGGCGTCTGCCAGCGTCGCCCAGGTCTTCCCGAAGCCTGCACANGc > 2:157175/2‑136 (MQ=255) ncccGTGGGTTTCTACCACGCCAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGACTTCCCGACGCCTGCACAGGCACCGAAGAAACCTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCcagc > 1:157287/2‑155 (MQ=255) gTGGGTTTCTACCACGCCAACCCCAATATCCAGCTCTTGCGCCCGCAGTCGCTGGTCTTCTGCCAGCATCGCCCAGGTCTTCCCGCCGCCTGCACAGGCCCCGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGACGATCGGGGTCGGGACGTAAGGGTTCGTTATTCATCAAGTTTATCCAGCGCCAGATTGAGTTCAACAATGTTGACAACCGGCTGGCCGATATAtttn < 1:157175/251‑2 (MQ=255) nntCNNNNNCGCNAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCTTGCACAGGCACCGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCcagc < 2:157287/144‑1 (MQ=255) tCTACCACGCCAACCACAATATCCAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCCTAGCACAGGTCTTCCCGACGCCTGCCCAGGCACCGAAGAAACCTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGACGATCGGGGTCGGGACGTAAGGGTTCGTTATTCATCACGTTTATCCAGCGCCAGATTGAGTTCAACAATGTTGACAACCGGCTGGCCGATATATTTCACCAGCg > 1:120785/1‑251 (MQ=255) nccAGCTCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAAATTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGCCGATCGGGGTCGGGACGGAAGGGTTCGTTATTCATCAAGTTTCTCCAGCGCCAGATTGAGTTCAACAATGTTGACAACCGGCTGGCCGATATATTTCACCAGCGGTTGTTGGCTGTAtttttc > 1:159095/2‑247 (MQ=255) | TTGGGATGACGGGAACCTGGCGCATTACTGTGCGCCAGTTCGTCCATTAAGATCAGCGCCGGGCGGCGGGCGAGGGCGGCATCGAGATCAAACTCGCTGATATGCCGCCCACGGTACGCCTGGCGTTTTAACGGCAGAACAGCCAGCCCTTCCAGCATGGCGGCGGTATCTTTTCGCCCGTGGGTTTCTACCACGCCAACCACAATATCCAGCCCTTGCGCCCGCAGTCGCTGGGCTTCTGCCAGCATCGCCCAGGTCTTCCCGACGCCTGCACAGGCACCGAAGAAAACTTTCAGCTTCCCCCGATGCGGCGCGGCAGTTTGTTCCAGCAGACGATCGGGGTCGGGACGTAAGGGTTCGTTATTCATCAAGTTTATCCAGCGCCAGATTGAGTTCAACAATGTTGACAACCGGCTGGCCGATATATTTCACCAGCGGTTGTTGGCTGTATTTTGC > NC_000913/724047‑724502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |