Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	690,924	C→T	Q287Q (CAG→CAA)	ybeX ←	CorC‑HlyC family protein YbeX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	690,924	0	C	T	100.0%	27.9 / NA	12	Q287Q (CAG→CAA)	ybeX	CorC‑HlyC family protein YbeX
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (5/7);  total (5/7)

AAGGTCAACGCCTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTC  >  NC_000913/690736‑691124                                                                                                                                                                                             |                                                                                                                                                                                                         aaGGTCAACGCCTGAAGCCCCATCAGAGTAATAAGCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGTGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTGCGGTTGGGGGGAGTCATCCGGGATTTTGACATGACCCTGAATAATACGCCGACTGTCGGCCATCGc                                                                                                                                            <  1:194027/251‑1 (MQ=255)                   cccATCAGCGAACTAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCGGCAGGCACAGAATACTAACGCCAGCAGCAGCCGAATGCGATGGCGTTAAATTACTGAGGCCAACTCCCTGTAGTTCTCTATCCAGTTTCGGTTTTCTTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGCCATGCACCTGAATAATCCGCCGACTGTCGGCCATCTCCACTTTGAAc                                                                                                                                  >  1:172750/1‑243 (MQ=255)                                 aatCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCgn                                                                                                                                                   <  1:28651/212‑2 (MQ=255)                                           ggCCAGACGGCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCGTCGTTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTgg                                                                                                                               <  1:35224/222‑1 (MQ=255)                                                          ggAGAGAAGGCCAGCGTTCCGCAGGAACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAAc                                                                                                                                  >  1:71550/1‑204 (MQ=255)                                                               gaAGGNCAGCGTTCCGCAGGCACCGAATAATAACGCCNGNAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGNGATCTATCCANTGTNNGTTTNANTNATCCAGCTTCGGTGGGGGTGAGTCATCCGNGATTTTGACATGAACCTGAATAANNCGNNNACNNTCGGc                                                                                                                                                  <  2:190673/183‑1 (MQ=255)                                                               gaAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTACCATTAATGAGGCAAAAGCCCTGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCCGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGACTAATACGCCGACTGTCGGc                                                                                                                                                  >  1:190673/1‑183 (MQ=255)                                                                                 ngCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGcc                                                                                    >  1:30759/2‑227 (MQ=255)                                                                                     ccGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGc                                                                         <  1:743/234‑1 (MQ=255)                                                                                                                     cTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCAt                                       >  1:90509/1‑236 (MQ=255)                                                                                                                                           aaaGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCAGCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCttn  <  1:25433/251‑2 (MQ=255)                                                                                                                                                          tctatcCAGTTTCGGTTTTATTCATCCAGCTTCGGTTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTGGGAACTGGGAACCGTCGATGGCGATAGTGTCGCCGCGCGCCGGAAGATGCCCAAAGGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTggg                           <  1:165082/211‑1 (MQ=255)                                                                                                                                                                                             |                                                                                                                                                                                                         AAGGTCAACGCCTGAAGCCCCATCAGCGAAATAATCGCCGCAGGCCAGACGTCGTAAGGAGAGAAGGCCAGCGTTCCGCAGGCACCGAATAATAACGCCAGCAGCAGGCGAATGCGCTGGCGTTCAATTAATGAGGCAAAAGCCATGTAGTTATCTATCCAGTTTCGGTTTTATTCATCCAGCTTCGGCTGGGGTGAGTCATCCGGGATTTTGACATGAACCTGAATAATACGCCGACTGTCGGCCATCGCCACTTTGAACTGGTAACCGTCGATGTCGATAGTTTCGCCACGCGCCGGAAGATGCCCAAATGCCTGCATCACCAGACCACCGATAGTGTCGACTTCTTCATCGCTAAAGTGGGTGCCGAACGCTTCGTTGAAGTCTTC  >  NC_000913/690736‑691124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑