| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 658,184 | C→T | intergenic (‑246/‑763) | crcB ← / → tatE | F(‑) channel protein/twin arginine protein translocation system ‑ TatE protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 658,184 | 0 | C | T | 94.1% | 42.6 / NA | 17 | intergenic (‑246/‑763) | crcB/tatE | F(‑) channel protein/twin arginine protein translocation system ‑ TatE protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (10/6); minor base G (0/1); total (10/7) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATCTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGGCGCGCATGGAATATGCTGGTGGCACTTCAGGCAGGAAACATCGTCG > NC_000913/657940‑658345 | gCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATcn < 1:150644/250‑2 (MQ=255) nttGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTCCATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAg > 1:53114/2‑249 (MQ=255) ggaggTGGCAATGCTGGTTGCCGCAGNACAGTTNNCTNTTACCTCTGTGTGGGAAAANAANNNTNNNANTTGTGNCTNNTTGATGGCGNAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGNGCGATGCTCNNGATGCAGATTTATCGGTTAAANCAGNNCNncngct > 2:56891/1‑189 (MQ=255) ggaggTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACAGCTGTGTGGGAAAAGAACGCGGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCgg < 1:56891/207‑1 (MQ=255) ccGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAACACGACGCATCGATGTTTGCCCTGCCGGAAGCCTTGCTGGCGCGCGATGATCATGATGCAGCTTTATCGGTTAAATCAGCACAGCTGCTGGAAGGc > 1:142029/1‑176 (MQ=255) gACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCgg < 1:11368/251‑1 (MQ=255) gAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGGCGCGCATGGAATATGCTGGTGGc > 1:83633/1‑250 (MQ=255) agaTTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCNg < 1:198539/114‑1 (MQ=255) naTTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGGAAACGTAACATGATGACGACAATCCTGACTATTCATGTTCCTTCAACGCCGGGGCGAGCAAGGAATATGCTGGAGGCACCACAAGCAGGaa > 1:204798/2‑250 (MQ=255) ccTCGTTGATGGCGCAGGCGGCGGAAAACGCCGCATCGCTGTTTGCCCTGCCGGCAGCATTGCTGGCGCGCGATGATCATGATGCCGATTTCTCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGGAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGGCGCGCATGGAATATGCTGGTGGCACTTCAGGCAGGAAACAtcgtcg > 1:98454/1‑251 (MQ=255) ggcggcGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGGCGCGCATGGAATATGCTGGTGGCACTTca > 1:14995/1‑218 (MQ=255) cggAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCgaga > 1:202456/1‑126 (MQ=255) ggAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGNNGCTGGan > 2:13799/1‑96 (MQ=255) ggAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATCAGCACAGCTGCTGGAAgg < 1:13799/99‑1 (MQ=255) gCTGTTGGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTGATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAAGTCCTCGGACTTTACGGGGAGAAAGTAAGCGTAACAGGATCACGACAATTCTGACGATTCATGTTCCTTCAACGCCgg < 1:146154/166‑1 (MQ=255) ccTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATTTATCGGTTAAATAAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGgcg > 1:235140/1‑161 (MQ=255) gCTGGCGCGCGATGATCATGATGCAGATGTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCGCGTACTTTACGGCGGGAAAGTAAACGGAACTGGTTGACGACATGTCTGACGATTCATGTTCCt < 1:84907/132‑1 (MQ=255) | GCAAAATCCTGCTATTTGATTTGTATGAGTGATAAGTGTAACGCCGAATAATCGTCGTTGGCGAATTTTACGACTCTGACAGGAGGTGGCAATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATCTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGGCGCGCATGGAATATGCTGGTGGCACTTCAGGCAGGAAACATCGTCG > NC_000913/657940‑658345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |