| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 60,338 | C→T | M3I (ATG→ATA) | rluA ← | 23S rRNA pseudouridine(746) and tRNA pseudouridine(32) synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 60,338 | 0 | C | T | 100.0% | 11.6 / NA | 6 | M3I (ATG→ATA) | rluA | 23S rRNA pseudouridine(746) and tRNA pseudouridine(32) synthase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/1); total (5/1) | |||||||||||
CACGCCGCTGGTAGCCATATCCAGACGATGCACCGATTCTGCCTGCGGATAATCACGCTGAATGCGCGTCATCACGCTGTCTTTGTGCTCTTCCAGACGACCCGGCACTGACAACAAACCGCTCGGCTTGTTGACCACCATAATATGGTCATCCTGATACAGGATAACCAACCAGGGTTCCTGCGGTGGATTGTAGTTTTCCATCCCCATTTTCGGCTCCGTTACTGATGCGTTACAACGATCAAACGCAGGGCATCCAGACGCCAACCTGCCTGATCCAGGCTTTCCATTACCTGCTGACGGTTGCTCTCAATGGCGGTCAGTTCGTCGTCACGAATGTTCGGGTTCACTGCACGCAGAGCTTCCAGACGAGACAGCTCGGCAGACAGTTTTTCGTCGGCTTCGTTACGCGCTGCATCAATCAATGCACGGGCAGATTTCTCG > NC_000913/60137‑60580 | cACGCNNCTNNNAGNNATATCCAGACGATGCACCGATTCNGCCTGCGGATAATCACGCTGAATGCGCGTNANCNCGCTNNCTTNGTGCTCTTCCNGACGACCCGGCACTGACAACAAACCGCTCGGCTTGTTGACCACCATAANANGGTCATCCTGAAACAGGCTCACCAACCAGGGNTCCTGCGGTGGATTGTAGCTTTccnatcgnnag > 2:193297/1‑202 (MQ=255) ncGATTCTGCCTGCGGATAATCACGATGAATGCGAGTCATCACGCTGTCTATGTGCTCTTCCTGACGAACCGGCACTGACAACAAACCGCTCGGCTTGTTGCCCACCATAATATGGTCCTCCTGATACAGGATAACCAACCAGGGTTCCTGCGGTGGATTGTAGTTTTCTATCCCCATTTTCGGCTCCGTTACTGATGCGTTACAACGATCAAACGCAGGGCCTCCAGACGCCAACCTGCCTGATCCAGGc > 1:203958/2‑251 (MQ=255) cACGCTGAATGCGCGTCATCACGCTGTCTTTGTGCTCTTCCAGACGACCCGGCACTGACAACAAACCGCTCGGCTTGTTGACCACCATAATATGGTCATCCTGATACAGGATAACCAACCAGGGTTCCTGCGGTGGATTGTAGTTTTCTAGCCCCATTTTCGGCTCCGTTACTGATGCGTTACAACGATCAAACGCAGGGCATCCAGACTCCAGCCTGCCTGATCCAGGCTTTCCATTACCTGCTGACggn < 1:26521/251‑2 (MQ=255) gacgacCCGGCACTGACAACAAACCGCTCGGCTTGTTGACCACCATAATATGGTCATCCTGATACAGGCTAACCACCAAGGGTTCCTGCGGTGGATTGTAGTTTTCTATCCCCATTTTCGGCTCCGTTACTGATGCGTTACAACGATCAAACGCAGGGCATCCAGACGCCAACCTGACTGATCCAGGCTTTCCATTACCTGCTGACGGTTGCTCTCAATGGCGGTCAGTTCGTTGTCACgcattgtctggg > 1:161486/1‑240 (MQ=255) gCTTGTTGACCACCATAATATGGTCATCCTGATACAGGATAACCAACCAGGGTTCCTGCGGTGGATTGTAGTTTTCTATCCCCATTTTCGGCTCCGTTACTGATGCGTTACAACGATCAAACGCAGGGCATCCAGACg > 1:212359/1‑138 (MQ=255) gaGTTTTCTATCCCCATTTTCGGCTCCGTTACTGATGCGTTCCAACGATCAAACGCAGGGCATCCAGACCCCAACCTGCCTGATCCAGGCTTTCCATTACCTGCTGACGGTTGCTCTCAATGGCGGTCAGCTCGCCGTCACGAATGTTCGGGTTCACTGCACGCAGAGCTTCCCGACGAGACAGCTCGCCAGACAGGTTTTCGTCGGCCTCGTTAAGCGCTGCATCAATCAATGCACGGGCAGATTTCTCg > 1:105104/2‑251 (MQ=255) aGTTTTCTATCCCCATTTTCGGATCCGTTACTGATGCGTTACAACGATCAAACGCAGGGCATCCAGACGCCAACCTGCCTGATCCAGGCTTTCCATTACCTGCTGACGGTTGCTCTCAATGGCGGTCAGTTCGTCGTCACGAATGTTCGGGTTCACTGCACGCAGAGCTTCCAGACGAGACAGCTCGGCAGACAGTTTTTCGTCGGCTTCGTTACGCGCTGCATCAATCAATGCACGGGCAGATTTCTCg > 1:92295/1‑250 (MQ=255) | CACGCCGCTGGTAGCCATATCCAGACGATGCACCGATTCTGCCTGCGGATAATCACGCTGAATGCGCGTCATCACGCTGTCTTTGTGCTCTTCCAGACGACCCGGCACTGACAACAAACCGCTCGGCTTGTTGACCACCATAATATGGTCATCCTGATACAGGATAACCAACCAGGGTTCCTGCGGTGGATTGTAGTTTTCCATCCCCATTTTCGGCTCCGTTACTGATGCGTTACAACGATCAAACGCAGGGCATCCAGACGCCAACCTGCCTGATCCAGGCTTTCCATTACCTGCTGACGGTTGCTCTCAATGGCGGTCAGTTCGTCGTCACGAATGTTCGGGTTCACTGCACGCAGAGCTTCCAGACGAGACAGCTCGGCAGACAGTTTTTCGTCGGCTTCGTTACGCGCTGCATCAATCAATGCACGGGCAGATTTCTCG > NC_000913/60137‑60580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |