| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 533,723 | C→T | P238L (CCT→CTT) noncoding (95/235 nt) |
allR → allZ → |
DNA‑binding transcriptional repressor AllR small RNA AllZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 533,723 | 0 | C | T | 100.0% | 21.8 / NA | 9 | P238L (CCT→CTT) noncoding (95/235 nt) | allR allZ | DNA‑binding transcriptional repressor AllR small RNA AllZ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/4); total (5/4) | |||||||||||
CAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGG > NC_000913/533481‑533909 | cAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCCCCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGACGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTCGTGTTGTTGCCGCTATCTCCATCTCCGGGCTTtcatca > 1:168010/1‑250 (MQ=255) ggCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCCCCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCTTTCATCAAGACTGACAGATGATCGTTTTg < 1:202406/251‑1 (MQ=255) cGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCGTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGGCGCTATCTCCATCTCCGGGCTTTCATCAAGACTGACAGAAGATCGTTTTgtc < 1:142635/251‑1 (MQ=255) gAACACGCGCGTGAACTGGGCTATACCGTAGATAAAGCAGAGCATGTTGTAGGTCTGTATTGCATAGATTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGGCGCTATCTCCATCTCCGGGCTTTCATCAAGACTGACAGAAGAACGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACgg > 1:109095/1‑202 (MQ=255) gAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCTTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTg > 1:91855/1‑201 (MQ=255) gTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGAGCTTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAACGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAACTTTGAAAGTTGGAAACATTTTCCaataaat > 1:168487/1‑250 (MQ=255) gCTTCTGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCTGGCTTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGATCTGGTCAGAGACACCGCCCTCGATATCAGCACGGCGTTGTGACTTAAAACACATCCATAATGTCTGTCTCATGCGGGTCTGCGGAGCGGGTATTTTTGACAAGATTTGAAAGTTGGAAAAATTTTCCAATAAGTAtaggtagg < 1:177190/245‑1 (MQ=255) gCAATTTACGCTGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCTTTCATCAAGACTGACagaag > 1:212613/1‑73 (MQ=255) ctccatctccGGGCTTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCGCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGGCGGTCGCGTTCCGCGGTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTcc < 1:120483/185‑1 (MQ=255) | CAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAATGTCTGTCGCATCCCGCTCTGCGGAGCGGGTTTTTTTGACAAAATTTGAAAGTTGGAAAAATTTTCCAATAAATAGAGGTAGG > NC_000913/533481‑533909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |