| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,562,620 | C→T | G19E (GGG→GAG) | yjiJ ← | putative transporter YjiJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,562,620 | 0 | C | T | 100.0% | 12.0 / NA | 8 | G19E (GGG→GAG) | yjiJ | putative transporter YjiJ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (3/5); total (3/5) | |||||||||||
TGCGAGGATCAACAACCCGCTCGCCAGGGCAGAAGCCAACAGAAATGGGCGCAGGCGCGATGGCTGGTGAAATGCGCCAAAAGAAAATAGCAGACTGCCAGCCAGATACCCCGCATAGTTGCCGCTGGCAATCCACGAGAGCTGGCTAAATGAAAACGATCCTTCCGCCATCATGACGGGCAACATAGGCGTATAAAGGAAGCGGCCTAAACCCATACCTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCG > NC_000913/4562382‑4562822 | tGCGAGGATCAACAACCCGCTCGCCAGGGCAGAAGCCAACAGAAATGGGCGCAGGCGCGATGGCTGGTGAAATGCGCCAAAAGAAAATAGCAGACTGCCAGCCAGATACCCCGCATAGTTGCCGCTGGCAATCCACGAGAGCTGGCTAAATGAAAACGATCCTTCCGCCATCATGACGGGCAACATAGGCGTATAAAGGAAGCGGCCTAAACCCAGACCTAAGGTCAGAACCAGCAGCTCGAAAAGcgcg < 1:74836/250‑1 (MQ=255) gAGGATCAACAACCCGCTCGCCAGGGCAGAAGCCAACAGAAATGGGCGCAGGCGCGATGGCTGGTGAAATGCGCCAAAAGAAAATAGCAGACTGCCAGCCAGATACCCCGCATAGTTGCCGCTGGCAATCCACGAGAGCTGGCTAAATGAAAACGATCCTTCCGCCATCATGACGGGCAACATAGGCGTATAAAGGAAGCGGCCTAAACCCATACCTAAGGTCAGAACCAGCATCTCGAAAAGCGCGGTGc < 1:143960/251‑1 (MQ=255) tCAACAACCCGCTCGCCAGGGCAGAAGCCAACAGAAATGGGCGCAGGCGCGATGGCTGGAGAAATGCGCCAAAAGAAAATAGCAGACTGCCAGCCAGATACCCCGCATAGTTGCCGCTGGCAATCCACGAGAGCTGGCTACATGAAACCGATCCTTCCGCCATCATGACGGGCAACATAGGCGTATAAAGGAAGCGGCCTAAACCCATACCTAAGGTCAGAACCAGCATCTCGAAAAGCGCGGTGCTgaa > 1:145166/1‑250 (MQ=255) gcAGGCGCGATGGCTGGTGAAATGCGCCAAAAGAAAATAGCAGACTGCCAGCCAGATACCCCGCATAGTTGCCGCTGGCAATCCACGAGAGCTGGCTAAATGGAACCCAGCCTTCCGCCATCATGACTGGCAACACATGCGTATAAAGGAAGCGGCCTAAACCCATACCTAAAGACAGAACCAGCATCTCGAAAAGCGCGGTTCTGAAAGAAAAGCGTTCTCCGGGATGCGTGGACGAAGGCATGTTTAAc < 1:253187/251‑1 (MQ=255) naCGGGCAACATAGGCGTATAAAGGAAGCGGCCTAAACCCATACCTAAGGTCAGAACCAGCATCTCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGAGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTtaataa > 1:159467/2‑162 (MQ=255) gCAACATAGGCGTATAAAGGAAGCGGNCTAAACNNATNCCTAAGGTCAGAACCAGCANCTNNNANNNCNCGGTGNTGNNAGAAAAGCGNTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGNTAACAAGTTNNTATCAAAAAGGTGAAGCATGCNAGCNNGNNANTGCnatn > 2:59996/1‑192 (MQ=255) gTATAAAGGAAGCGGCCTAAACCCATACCTAAGGTCAGAACCAGCATCTCGAAAAGCGCGGTGCTGAAAGAAAAGCTTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAGTCCAGCCTGTTAATTCGAGGATTTAGGGGTAAAGCTATAAAAACGATTTGGGTCGCTAACGATATAAATATTACCAGAGGCATCCATCg < 1:232340/251‑1 (MQ=255) cATACCTAAGGTCAGAACCAGCATCTCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTttgt < 1:201984/106‑1 (MQ=255) | TGCGAGGATCAACAACCCGCTCGCCAGGGCAGAAGCCAACAGAAATGGGCGCAGGCGCGATGGCTGGTGAAATGCGCCAAAAGAAAATAGCAGACTGCCAGCCAGATACCCCGCATAGTTGCCGCTGGCAATCCACGAGAGCTGGCTAAATGAAAACGATCCTTCCGCCATCATGACGGGCAACATAGGCGTATAAAGGAAGCGGCCTAAACCCATACCTAAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCG > NC_000913/4562382‑4562822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |