| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,519,461 | G→A | F288F (TTC→TTT) | yjhU ← | putative DNA‑binding transcriptional regulator YjhU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,519,461 | 0 | G | A | 100.0% | 10.1 / NA | 7 | F288F (TTC→TTT) | yjhU | putative DNA‑binding transcriptional regulator YjhU |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/2); total (5/2) | |||||||||||
GTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACTGCGCCTAAATCCCGATACGTCTGCATTTCCTTCTTATTCAGCACGCCCACCCGAATCAGGGGATTTTCATCAAGCGCGTTACCCACGACAAAAAAGGCTTTCGTACAGCG > NC_000913/4519346‑4519691 | ttAATGCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGCGCCGTGACATATCCTCCCAGCAGTGCACCCAACTTTGCGTCATAGCCTCTTTCCCCACCAGCAAGAAAGATc < 1:173449/121‑1 (MQ=255)gTAATTCANANNNCNNCAAAAACTCTGCCGTTACTTCATCAACAATCAGGTCCGTGACATNTCCTCCCAGCCGGCCNCCNAACGNTGCNTCATAGCCTCTTTCCCCACCAGCAAGAAAGATc > 2:173449/1‑122 (MQ=255) tCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCGCCAGCAAGAAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACTGCGCCTAAATCCCGATACg < 1:246138/250‑1 (MQ=255) ncGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGAAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACTGCGCCTAAATCCCGATACGTCTGCATTTCCTTCTTATTCAGCACGCCCACCCGAATCAGGGGAttt > 1:53358/2‑251 (MQ=255) cccAGCAGGGCACCCAACGTTGAGTCATAGCCTCTTTCCCCACCAGCAAGAAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGa > 1:201458/1‑148 (MQ=255) naaCGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGAAAGATCTTCCGATCAATCTGACTTAGATGAGCCAGCCTGATTCCCAGAATCCGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACTGCGCCTAAATCCCGATACGTCTGCATTTCCTTCTTATTCAGCACGCCCACCCGAATCAGGGGATTTTCATCAAGCGCGTTACCCACGACaaac > 1:28058/2‑249 (MQ=255) ntctTTCCCCACAAGCAAGAAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACTGCGCCTAAATCCCGATACGTCTGCATTTCCTTCTTATTCAGCACGCCCACCCGAATCAGGGGATTTTCATCAAGCGCGTTACCCACGACAAAAAAGGCTTTCGTACAGCg > 1:67814/2‑250 (MQ=255) | GTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAAGGAAGATCTTCCGTTCAATCTGCCTTAGCTGAGCCAGACTGATTCCCAGAATACGCTGGTCAACATCAGCCACGACGGGCATCCCTTCCTTGTCATAGAAGCGACCACAAATGACACCTACTGCGCCTAAATCCCGATACGTCTGCATTTCCTTCTTATTCAGCACGCCCACCCGAATCAGGGGATTTTCATCAAGCGCGTTACCCACGACAAAAAAGGCTTTCGTACAGCG > NC_000913/4519346‑4519691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |