| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,237,200 | C→T | Q102* (CAG→TAG) | yjbG → | capsule biosynthesis GfcC family protein YjbG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,237,200 | 0 | C | T | 100.0% | 22.9 / NA | 10 | Q102* (CAG→TAG) | yjbG | capsule biosynthesis GfcC family protein YjbG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/4); total (6/4) | |||||||||||
GCAGTGAGGCCAAAACGCTAACGGGCGCAGAGCATTTAATCGATCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGA > NC_000913/4236988‑4237414 | gcagTGAGGCCAAAACGCTAACGGGCGCAGAGCATTTAATCGATCTGGTAGGCCACCCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGACGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAGCAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCTAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCaaaa > 1:34102/1‑250 (MQ=255) ncATTTAATCGATCTGGTAGGCCAACCGCGGCTGGCAAGCAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCTAGCAAATTCAGGCGTTGAAAGTGACGggcagg > 1:68048/2‑214 (MQ=255) gTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGTTGATTAGCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCATCGCCGACGATGCCGCTGCGATTAACGCCTTACGCTAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGAGCCCGATATCGTCCGCGTTGCCGAACGCGGTAAccn < 1:32619/251‑2 (MQ=255) tGGCAAACAGCTGGTGGCCCGGTGCGGTGCTTAGCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCTAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAAc > 1:79679/1‑251 (MQ=255) gCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGCACAGGGCGCAGATTCCAGCGCCGCCGATGCCGCTGCAATTAACGCCTTACGCTAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATc > 1:106030/1‑168 (MQ=255) ncGGCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGACGCTGCGATTAACGCCTTACGCTAGCAAATTCAGGCGTTGACAGTGACGGGCAGGCAAAAAATAAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAAACCGCCGTTGCAGGGCAACTACACGc > 1:52264/2‑173 (MQ=255) ggCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCTAGCAAATTCAGGCgn < 1:52478/78‑2 (MQ=255) gCAGAACAGGGCGCAGATTCCAGCGCCGACGCTGCCGCTGCGATTAACGCCTTACGCTAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGacc > 1:71859/1‑179 (MQ=255) gacgttgcttcttccgatcttaTTAACGCCTTACGCTAGCAAATTCAGGCGTTAAAAGTGACGGGCAGTCAAAAAATCAATCTTGATCCCAACATCGTCCGGGTTGCCGACCGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGGCACGTTGTTCGGTCTTGTCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGa < 1:131066/230‑1 (MQ=255) tncaNGCCTTNCGCTNGCAAATTCAGGCGTTNAAAGTGACGGGCAGGCAAANNANCAATCNTGATc < 2:106030/63‑1 (MQ=255) | GCAGTGAGGCCAAAACGCTAACGGGCGCAGAGCATTTAATCGATCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGA > NC_000913/4236988‑4237414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |