| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,592,762 | C→T | A226T (GCG→ACG) | livF ← | branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,592,762 | 0 | C | T | 100.0% | 45.2 / NA | 16 | A226T (GCG→ACG) | livF | branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (11/5); total (11/5) | |||||||||||
TGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCTGGTTGGCGTTCTGCTCGACGAGAAAGATAGTCATCCCCTGCTCGCGCAGCTGCTCGATGGTGTCGAAAATTTGCTGGATGATAATCGGCGCAAGACCGAGCGATGGCTCATCAAGCAGTAGCAAACGCGGGTTGCTCA > NC_000913/3592563‑3592980 | tGCCGGATGCGGCGTAAACGCCTTCTCAGGCATCCAAGATCATGCAAATTCCAAATATTGCCACTAACCTAGTAGGCCTGCTAAGCGCAGCGACTCAGGCAATTTTACATTTGTCACCTGTTTCAAAGGAGTCTTTTGACTCAATATCAATCAACGTGATCTTACCCGCCTAAATACGCACTTCTCAACCCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGAACTACATGGCCGTTTTCAAGCAc > 1:169126/1‑251 (MQ=255) cTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCtt > 1:94724/1‑251 (MQ=255) ngCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCCGCGCATCAGGCAATTTTACATTTGTCCCCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGcc > 1:30672/2‑251 (MQ=255) gCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCt > 1:220615/1‑251 (MQ=255) aaaTTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCGTCATTCGTCAGCAGCGCATCACCAGGATCGGAAAGCACTACATTGCCGTTTGCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCTGGTTGGCGTTCTGCTc < 1:36703/251‑1 (MQ=255) ncagcgcaTCAGGCAATTTTACATTTGTAACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCTGGTTGGCGTTc > 1:66410/2‑205 (MQ=255) aTTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATcc < 1:17956/163‑1 (MQ=255) gTCACCTGTCTCAAAGGAGTCTTTTTACTCCCTATCAATCAACGTTTTATTTCCCCCCTAAATACGCGCTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCan < 1:23725/105‑2 (MQ=255) ncAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGcc > 1:149452/2‑157 (MQ=255) cTTTTGACTCCCTATCAATCAACTTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTan < 1:156715/143‑2 (MQ=255) cTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGNCAgnnnn > 2:156715/1‑137 (MQ=255) nnttNNNNNCCTNTCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGcc < 2:149452/144‑1 (MQ=255) attaCCCGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCCGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCTGGTTGGCGTTCTGCTCGACGAGAAAGATAGTCATCCCCTGCTCGCGCAGCTGCTCGATGGTGTCGAAAATTTGCTGGATGATAATCGgc > 1:113699/1‑209 (MQ=255) ncGCCTAAATACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCTGGTTGGCGTTCTGCTCGACGCGAAAGATAGTCATCCCCTGCTCGCGCAGCTGCACGATGGTGTCGAAAATTTGCTGGATGATAATCGGCGCAAGACCGAGCGATGGCTCATCAAGCAGTAg > 1:27763/2‑236 (MQ=255) aTACGCACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACAAGTATCGGAAAGCACTACATGGCCGTTTTCCCGCACGTAGCCGCGCTCAGCCAGCTTTAGCGCCTGGTTGGCGTTCTGCTAGACGAGAAAGATAGTCATCCCCTGCTCGCGCAGCTGCTCGATGGTGTCGAAAATTTGCTGGATGATAATCGGAGCAAGACCGAGCGATGGCTCATCAAGCAGTAGCAAACGCGGGTTGCtca > 1:222449/1‑245 (MQ=255) cACTTCTCACCGCTTCATTCGTCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCTGGTTGGCGTTCTGCTCGACGAGAAAGATAGTCATCCCCTGCTCGCGCAGCTGCTCGATGGTGTCGAAAATTTg > 1:78644/1‑175 (MQ=255) | TGCCGGATGCGGCGTAAACGCCTTATCAGGCCTACAAGATCGTGCAAATTCAACATATTGCCACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCCTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACCGCTTCATTCGCCAGCAGCGCATCACCAGTATCGGAAAGCACTACATGGCCGTTTTCCAGCACGTAGCCGCGATCCGCCAGCTTTAGCGCCTGGTTGGCGTTCTGCTCGACGAGAAAGATAGTCATCCCCTGCTCGCGCAGCTGCTCGATGGTGTCGAAAATTTGCTGGATGATAATCGGCGCAAGACCGAGCGATGGCTCATCAAGCAGTAGCAAACGCGGGTTGCTCA > NC_000913/3592563‑3592980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |