| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,510,022 | C→T | E319K (GAA→AAA) | yhfX ← | putative PLP‑binding protein YhfX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,510,022 | 0 | C | T | 100.0% | 23.4 / NA | 9 | E319K (GAA→AAA) | yhfX | putative PLP‑binding protein YhfX |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/3); total (6/3) | |||||||||||
CCACAAATCGCGCCATTACGCCCCCAGAGAGTTTCCAAGACTGTCATAACGACCGACGATTTCCGGTTCGCCACGATGAATACCGGACACCAGCACCACATCGCTACGGGTGACAAAAATCTGCGTGCGAAAACAGAGCACCACTGCACTGCTTACCGGAAACTCGCCTGCCAGCGGCAGGGTGTAGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTCAGTAATCTTTTGATTTTCTGGCGTAAACACCAACGCATGTTGCGCATGACCACGACGATAGTAACCGCCGCCGTAGCAGTAGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGTGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATG > NC_000913/3509798‑3510249 | ccacAAATCGCGCCATTACGCCCCCAGAGAGTTTCCACGACTGTCATAACGACCGACGATTTCCGGTTCGCCACGATGAATACCGGACACCAGCACCACATCGCTACGGGTGACAAAAATCTGCGTGCGAAAACAGAGCACCACTGCACTGCTTACCGGAAACTCGCCTGCCAGCGGCAGGGTGTAGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTTAGTAATCTTTTGATTTTCTGGCGt > 1:103904/1‑249 (MQ=255) gACAAAAATCTGCGTGCGAAAACAGAGCACCACTGCACTGCTTACCGGAAACTCGCCTGCCAGCGGCAGGGTGTAGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTTAGTAATCTTTTGATTTTCTGGCGTAAACACCAACGCATGTTGCGCATg > 1:6877/1‑162 (MQ=255) ngAAAACAGAGCACCACTGCACTGCTTACCGGAAACTCGCCTGCCAGCGGCAGGGTGTAGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTTAGTAAACTTTTGATTTTCTGGCGTAAACACCAACGCATGTTG‑ACATGACCACGACGATAGTAACCGCCGCCGTAGCAGTAGCTGTCGCCACGGAAATGATgg > 1:69038/2‑200 (MQ=255) ggAAACTCGCCTGCCCGCGGCAGGGTGTAGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTTAGTAATCTTTTGATTTTCTGGCGTAAACACCACCGCATGTTGCGCATGACCACGACGATAGTAACCGCCGCCGTAGCAGTAGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGc > 1:85217/1‑230 (MQ=255) cAGGGTGTAGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTTAGTAATCTTTTGATTTTCTGGCGTACACACCAACGCATGTTGCGCATGACCACGACGATAGTAACCGCCGCCGTAGCAGTAGCTGTCGCCACGGAAATGACGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGTGCCCGTCAGCGCATGACCGGGTTCGGCATg > 1:246987/1‑249 (MQ=255) ngntgNCGATANTGCTNTCATCCACAGTTTTGNGATTGGTTGTAGTAATCTTNNGNGGTTCNGGCGt < 2:103904/63‑1 (MQ=255) aGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTTAGTAATCTTTTGATTTTCTGGCGTAAACACCAACGCATGTTGCGCATGNNCACGACNNt > 2:9054/1‑99 (MQ=255) cATCCACAGTTTTGAGATTGGTTTTAGTAATCTTTTGATTTTCTGGCGTAAACACCAACGCATGTTGCGCATGACCACGACGATAGTAACCGCCGCCGTAGCAGTAGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAgg < 1:114993/166‑1 (MQ=255) aTCCACAGTTTTGAGATTGGTTTTAGTAATCTTTTGATTTTCTGGCGTAAACACCAACGCATGTTGCGCATGACCACGACGATAGTAACCGCCGCCGTAGCAGTAGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGTGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATg < 1:9054/251‑1 (MQ=255) | CCACAAATCGCGCCATTACGCCCCCAGAGAGTTTCCAAGACTGTCATAACGACCGACGATTTCCGGTTCGCCACGATGAATACCGGACACCAGCACCACATCGCTACGGGTGACAAAAATCTGCGTGCGAAAACAGAGCACCACTGCACTGCTTACCGGAAACTCGCCTGCCAGCGGCAGGGTGTAGTCGATACTGCTGTCATCCACAGTTTTGAGATTGGTTTCAGTAATCTTTTGATTTTCTGGCGTAAACACCAACGCATGTTGCGCATGACCACGACGATAGTAACCGCCGCCGTAGCAGTAGCTGTCGCCACGGAAATGATGGGAGATTTCACTTAACCAGAGCATCGCGATACGTTCAGGCTGATCGCCCTGCTGGTTTGCCGGAATAGTGCCCGTCAGCGCATGACCGGGTTCGGCATGAGTCACACCGTATTGCGCCAGTAATG > NC_000913/3509798‑3510249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |