| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,837,623 | T→C | E161E (GAA→GAG) | hydN ← | putative electron transport protein HydN |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,837,623 | 0 | T | C | 100.0% | 15.3 / NA | 8 | E161E (GAA→GAG) | hydN | putative electron transport protein HydN |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (4/4); total (4/4) | |||||||||||
GTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGG > NC_000913/2837395‑2837825 | gTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGCTCAAGTTTATTACGATAGacac > 1:57783/1‑251 (MQ=255) cGGCAGTCACAGGTCGGCGATACCGCCCACTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGACAGACCAGTTCTGTAAGATTTTTAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGCTCAAGTTTATTATGATCGACACAAATCAGCGCATGAGTCGGGCCAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGAACAGGTCGCCTTTATTGGCATCGGCTTTGTc > 1:245284/1‑249 (MQ=255) ggCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGCTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAgn < 1:25673/251‑2 (MQ=255) gcccgcTCCGTATTCTACGAATATTTCCGGGCATTCCTTTGATGCCAGAACCGTTCTGTCAGATTTTTAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGCTCACGTTTATTACGATCGACACAAATCAg > 1:104581/1‑141 (MQ=255) gcttgtgctcttccgatctgTACGGCGGCGTTTTGCTGCGCTCAGTTGCTCAAGTTTATTACGATCGCCACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGTCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAgg < 1:22211/232‑1 (MQ=255) gAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGCTGCTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACAAGCCGGGCCGTCTTCACGATGGTTGCACCGGTCGCATTTATTGGCTACGGCTTTGTCAGCACGTACATTCAGCCCCGCGCCGCTGTTGCGGATCACCGGa > 1:252604/1‑199 (MQ=255) gcncCGTANGGCGNCGTTTTTCTGCGCTCNGTTGCTCAAGTTTATTACGNNCNACACANATCAg < 2:104581/64‑1 (MQ=255) gTTTTTCTGCGCTCAGTTGCTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCAGTTATTGGCTTCTGCTTTGTCAGcccn < 1:67869/139‑2 (MQ=255) | GTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGG > NC_000913/2837395‑2837825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |