| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,867,508 | C→T | P201S (CCG→TCG) | yeaG → | protein kinase YeaG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,867,508 | 0 | C | T | 93.8% | 38.7 / ‑5.7 | 16 | P201S (CCG→TCG) | yeaG | protein kinase YeaG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (10/5); minor base G (1/0); total (11/5) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
GCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAAAGTGCTGCATCCCTTG > NC_000913/1867261‑1867732 | gtttGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCACGGTCAACGATCATACGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGCAAAAGAGTATGGCATTTCTCGCCGTTATCTCGGCACCATCATGACGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTACGTTCCGGGTAGTGAAGGTCTGGTCGt > 1:250610/3‑251 (MQ=255) tGAAATCATTAATGCAGCTAGTACCGATTTATGTATTGAGCGCGAACGGAGAGCGCAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGCGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATCTCACTAAGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGcaaca > 1:104487/1‑250 (MQ=255) gCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCTACGATAATCCGATCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGACGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGCATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTa > 1:186735/1‑242 (MQ=255) gAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCaaa > 1:233561/1‑223 (MQ=255) tAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAACAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCCTCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGCTATCACTAAGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCgcgc > 1:115412/1‑251 (MQ=255) tCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGACCCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCg < 1:15913/250‑1 (MQ=255) aTCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTGTATCGGCACCATCATGTCGACATGGGCGGCCAAACGCCTGCATGACTTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCCACAAATTGCt > 1:236845/1‑167 (MQ=255) cAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCg > 1:40479/1‑181 (MQ=255) aaGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGCCGCCGTGGGCGGCAAAACGCATGCATGAATTTGGTGGCGATATCACTAAGATCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGATCAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACAACgcgc > 1:123919/1‑249 (MQ=255) tGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTACGTTCCGGGCAGTGAAGGTCTGGTAGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGcc > 1:234919/1‑251 (MQ=255) aaaaaGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGTGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAACCTCGAACACTACGCGCAGAATGACCCGGACGCCTAc < 1:42373/251‑1 (MQ=255) gCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGCCGGCAAAAAGACAGAATGAATTTGGTGGCGATATCCCTAAGTTCCGGGTAGTGAAGGTCTGgtcgtc > 1:127649/1‑109 (MQ=255) gggCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGACTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGAGCATGGGATTCGtt > 1:18509/1‑251 (MQ=255) cggcAAAACGCCTGCATTAATTTGGTGGCGATATCATTAAGTTCCGGGTAGTGAAGGGCTGGTCTTCAATTCTGCAACAAAGTGCTAGCGCCAAAACGGAACCGGGCTGTGAGAACAACCAGGATATCGCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAAt < 1:234513/182‑1 (MQ=255) natatGACTAAGTTCCGGGTAGTGAAGGTGTGGGCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAAACCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAACGtgctgc > 1:77970/2‑250 (MQ=255) aaGTTCCGGGTAGTGAAGGTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAAAGTGCTGCATCCCTTg < 1:73433/249‑1 (MQ=255) gaatgTCTGGTCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCTGCGATGAGAACAACCAGGGCATCTCCGCGCGGGTTGTGAAAGGCGATATTCGGAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTAc < 1:134680/141‑1 (MQ=255) | GCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAAAGTGCTGCATCCCTTG > NC_000913/1867261‑1867732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |