| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,867,262 | C→T | L119F (CTT→TTT) | yeaG → | protein kinase YeaG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,867,262 | 0 | C | T | 85.7% | 13.4 / NA | 7 | L119F (CTT→TTT) | yeaG | protein kinase YeaG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (3/3); minor base G (0/1); total (3/4) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTG‑GGTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCA > NC_000913/1867139‑1867383 | ttttACGGCATGGATGACGCGATTGAACAGATTGGCTCTTATCTGAATCTCGCGGCTTAGGGGTTTTAAAAGAAGAAACAATTCCTGTATCTGCGGGGGCCGGTG‑TGTGGGGGTTAATCATCTTTCGCTGAGCGATTGAAATCATTAATTCAGCTCGTTCCGAGTGATGTTTTTAGCGCTATTGGTTAGCTTAGTCCGGTCAACGATCATCCGTTCTATCTTTTCAATCCGCAGGAAGATGCGCa < 1:184499/245‑1 (MQ=255) ngATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTG‑GGTGGGGGTAAATCATCGTTTg > 1:203758/2‑108 (MQ=255) naaCAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAANAAATCCTGTNNCTNCGGGGNCNNNTN‑NNTGNGGGTAAATCATCGTTTGCTNAGNNACTGAANTCATTAATGCAGCTCGTACCGATTTa < 2:56817/142‑1 (MQ=255) gAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTG‑GGTGGGGGTAAATCATCGTTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTa > 1:56817/1‑143 (MQ=255) cgGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCGGCTGGGGCCT‑TGTGGTGGGGGTAAATCATCGGTTGCGGAACGACTGAAATCATTAATGCATCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTa < 1:238050/141‑1 (MQ=255) gaagaaACAAATCCTGTATCTGCTGGGGCCTGGG‑GGTGGGGGTAAATCATCGTTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAgc < 1:126373/106‑1 (MQ=255) ggtgggGGTAAATCATCGTTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATCGAGCGCGAACGGCGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATcc > 1:171941/1‑125 (MQ=255) | TTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTG‑GGTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCA > NC_000913/1867139‑1867383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |