| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 131,332 | G→A | intergenic (‑72/‑283) | yacH ← / → acnB | DUF3300 domain‑containing protein YacH/AcnB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 131,332 | 0 | G | A | 88.9% | 14.1 / NA | 9 | intergenic (‑72/‑283) | yacH/acnB | DUF3300 domain‑containing protein YacH/AcnB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (5/3); minor base C (1/0); total (6/3) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
AACGTAACCGCGGCAGCGTCAGACACAGCCAGTTGTGTCGATTGCGGTTCCACAGGCGCTTCCACTGTGCGGCTTTTTATATATAGCCCGGTAGAGGCGGCACAAAGCCCGGCACTGCAAATTAGCGCCAGCACATGGGGTTTAAACGGCAAAGTCATTTTCATAATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAGAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCG > NC_000913/131097‑131517 | aaCGTAACCGCGGCAGCGTCAGACACAGCCAGTTGTGTCGCTTGCGGTTCCACAGGCGCCTACACTGTGAGGCTTTTTATATATAGCGCGGTAGAGAAGGCCCAAAGCCCGGCACTGCAAATTAGCGCCCGCACATGGGGTTTAAACGGCAAAGTCATTTTAATCATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAAAGGCGGTAGATTaa > 1:171904/1‑250 (MQ=255) cAGCGTCAGACACAGCCAGTTGTGTCGATTGCGGTTCCACAGGCGCTTCCACTGTGCGGCTTTTTATATAAAGCCCGGTAGAGGCGGCACAACGCCCGGCACTGAACATTAGCGCCAGCACATGGGGTTTAACCGGCAAAGTCATTTTCATAATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAAAGGCGGTAGTTTAAATTTTGACTAATCt > 1:176260/1‑251 (MQ=255) tCCACAGGCGCTTCCACTGTGCGGCTTTTTATATATAGCCCGGTAGAGGCGGCACAAAGCCCGGCACTGCAAATTAGCGCCAGCACATGGGGTTTAAACGGCAAAGTCATTTTCATAATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAAAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATgn < 1:65487/250‑2 (MQ=255) cAAATTAGCGCCAGCACATGGGGTTTAAACGGCAAAGTCATTTTCATAATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAAAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATg < 1:214228/251‑1 (MQ=255) ggTTTACACGGCAAAGTCATTTTCATAATTCGGATCTAAAGGAAATCGCAATGGTCGGCGCACTGCCACCCGCAGGTGCTGTGACTCCGCGTATAAACAGGCGGTAGTTTAAATTTTGACTAATCTTGGGa > 1:244661/1‑131 (MQ=255) aaaGTCATTTTCATAATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACACGCAGGTGCTGTGAATCCGAGTATAACAAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGACAgg > 1:144606/1‑133 (MQ=255) gATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAAAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGGGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCATGCTATTCTGCCCg > 1:749/1‑251 (MQ=255) cTGTGAATCCGAGTATAAAAAGGCTGTAGGTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTTATTATCTCCATGCGAATTAACGAAGTTTTTACTGAGGGAAACAATCTCGAGACCATCCTTAACGATTCAGcc < 1:168540/141‑1 (MQ=255) naaTCCGAGTATAAAAAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGcc > 1:76666/2‑199 (MQ=255) | AACGTAACCGCGGCAGCGTCAGACACAGCCAGTTGTGTCGATTGCGGTTCCACAGGCGCTTCCACTGTGCGGCTTTTTATATATAGCCCGGTAGAGGCGGCACAAAGCCCGGCACTGCAAATTAGCGCCAGCACATGGGGTTTAAACGGCAAAGTCATTTTCATAATTCGGATCTCAAGGAAATCGCAATGGTCGGCGAACTGCCACCCGCAGGTGCTGTGAATCCGAGTATAAAGAGGCGGTAGTTTAAATTTTGACTAATCTTGGGATTCGTTGAGAAAGGTGATTATCACCATGCGAATTAACGAAGTTTTTACGGAGGGAAACAATCTCTAGACCATCCTTAACGATTCAGCCACTTTTTTATGTTGCTTTTTTGTAAACAGATTAACACCTCGTCAAAATCCTGCTATTCTGCCCG > NC_000913/131097‑131517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |