| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,597,469 | G→A | intergenic (‑5027/+1148) | hipB ← / ← lsrK | antitoxin/DNA‑binding transcriptional repressor HipB/autoinducer‑2 kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,597,469 | 0 | G | A | 100.0% | 17.6 / NA | 9 | intergenic (‑5027/+1148) | hipB/lsrK | antitoxin/DNA‑binding transcriptional repressor HipB/autoinducer‑2 kinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (6/3); total (6/3) | |||||||||||
GATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCAACCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGCCTAAAATGGCGACGATTGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGG > NC_000913/1597223‑1597672 | gatgaCAGAGTCTTGTTCCTGCACATTCAGGGATCAGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCAACCCCCACTCGCGAATAGACGCCTCCCCAGTTCCTTGATTTCCAATTTGCAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGCCTAACATGGCGACGATTGAACTCGTGACATAAc > 1:208867/1‑251 (MQ=255) gCATTGCCACCGATAATCGTATTTTCAGCCGTAACCAACCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAAACATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGCCTAAAATGGCGACGATTGAACTCGTGACATAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTc < 1:250821/251‑1 (MQ=255) tCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAACCACTCACCACCCTTT‑CAACGACAACCTGGCCATTACTGCCCGCCTCATAGCCTCAAATGGCGACAATTGAACTCGTGACATAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAACTACCTATTTCGAATAATTCGGTCGTCAGAACAAAGTACTCTCCCTCAACATTGACCGTCCCGACGcctcct > 1:120548/1‑251 (MQ=255) gAATCATTATTTTTTATTAGCCACTCGCCACCCTTGTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGCCTAAAATGGCGACGATTGAACTCGTGACATAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTg < 1:200018/251‑1 (MQ=255) naCTCGCCCCCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGCCTAAAATGGCGACGATTGAACTCGTGACATAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAAtt > 1:76269/2‑139 (MQ=255) gCCACCCTTTGCAACGACAACCTGTCCATTGCTGCCCGCCTGATAGCCTAAAATGTCGACGATTGAACTCGTGACATAACCCTTATCCGTAATATTTAATGAACCTGTGcc < 1:42296/111‑1 (MQ=255) ccTGGCCATTACTGCCCGCCTGATAGCCTAAAATGGCGACGATTGAACTAGTGACATAACCATTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTc > 1:172351/1‑106 (MQ=255) ccgaTTGAACTAGTGTCATAACCCTTATCCGTACTATTTAATAAACCTGGGCCATAGCTACCTATTTCGAATAATTCGGTCGGCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCACGACGCCGCCTGTCGNAGANNNNNAtnnnnnn > 2:152221/2‑144 (MQ=255) gTGACATAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGACCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAgg > 1:118046/1‑209 (MQ=255) | GATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCAACCCCCCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACCCTTTTCAACGACAACCTGGCCATTACTGCCCGCCTGATAGCCTAAAATGGCGACGATTGAACTCGTGACGTAACCCTTATCCGTAATATTTAATGAACCTGTGCCATAGCTACCTATTTCGAATAATTCGGTCGTCAGAACAGAGTCCTCTCCCTCAACATTGACCGTCCCGACGCCTCCTGTCGAAGAACCTAATCTTAAATAGCCTCCATCGACGTGACCCTTCTGTTTAATATTCAGCGTCCCCGTTCCGGATTGACCCACATTTAAAGG > NC_000913/1597223‑1597672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |