| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,541,836 | G→A | A252V (GCC→GTC) | narZ ← | nitrate reductase Z subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,541,836 | 0 | G | A | 100.0% | 23.6 / NA | 11 | A252V (GCC→GTC) | narZ | nitrate reductase Z subunit alpha |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/6); total (5/6) | |||||||||||
CATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAACGCGTTCCGGCGGCGTAAGAAACCATCGACATCGCCGGGATCGGCGAGAAACCGGC > NC_000913/1541654‑1542032 | caTGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCCGCCACTGGTCGCACAATTTGGCCACTTCAGAGTCGTCAGGGGTAATGGCGCTGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGCAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGACGATGATGTAGCTGGAGTTATACCAGTCGGCa > 1:236882/1‑215 (MQ=255) aTCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGACGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATAcc < 1:90612/251‑1 (MQ=255) ccTTGTTTCGGTGCCAGCCTCTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTNCCTNTGTANCGNACTTCGGTAAAGAGGNGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGACGNNGNNNTNGCTGGAGt < 2:181619/166‑1 (MQ=37) ccTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGAAGTCAGGGGTACTGGAGATGGATTTAGTGACTTTGTAGCGTACTTCAGTAAAGATGTGGGCGTCCGGAGTACGTGTCTGCGGTACGTTAGGCCCACAGACGATGATGTAGATGGAGt > 1:181619/1‑166 (MQ=255) attagtCTGGGGTAATGGCTATGGTTTGAGTGCTTTTGTAGCGTACTTCGGTAAAGATGTGGGCGTCCGGCGTACGTGTCGGCGGGACTTTAGACCCCCAGACGATGCGGTAGCGGGGGGTATACCAGTCGGCAGATGCCGGTACGTCGGTTTGCTCGCCGCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAATTTAAACAGGTGCCGCCAAGCAGCGACAGATAACGCGTTCcg < 1:192849/249‑1 (MQ=255) ccgatcggTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGACGATGAGGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGGTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAACGCGTTCCGGCGGCGTAAGAAACCATCGACATCGCCggg < 1:123843/244‑1 (MQ=255) tAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGACGATGATGTAGCTGGAGTTATACCAGt > 1:232252/1‑91 (MQ=255) cGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGACGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCTAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAACGCGTTCCGGCGGCGTAAGAAACCATCGACATCGCCGGTATCGGCGAGAAACCGGc < 1:194166/250‑1 (MQ=255) gTACGTGTCTGCGGTACGTTAGACCCCCAGACGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGGCGCAAAACCAGCCGGNGAANNNNnaannnnnn > 2:148983/1‑144 (MQ=21) ccAGANGANNATNNAGCNGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGnt > 2:134331/1‑55 (MQ=17) ccAGACGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGc < 1:134331/76‑1 (MQ=255) | CATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTTAGTGCCTTTGTAGCGTACTTCGGTAAAGAAGTGGGCGTCCGGCGTACGTGTCTGCGGTACGTTAGACCCCCAGGCGATGATGTAGCTGGAGTTATACCAGTCGGCAGATTCCGGTACGTCGGTTTGCTCGCCCCAGGTCATCGGCGAGGCGGGCGGCAGGTCGCAATACCAGTCGTAGAAACTTAAACAGGTGCCGCCAAGCAGCGACAGATAACGCGTTCCGGCGGCGTAAGAAACCATCGACATCGCCGGGATCGGCGAGAAACCGGC > NC_000913/1541654‑1542032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |