Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3543180	3543312	133	2 [1]	[1] 3	rpnA	recombination‑promoting nuclease RpnA

GCTGGAGTCGAGCAGCTTTATTGATGACGATCTGCGTGAAAGCTATTCCGATGTGCTGTGGTCGGTGAAAACGGAACAAGGACCAGGATACATCTATTGTCTGATTGAACATCAAAGCACCTCAAACAAACTGATCGC  >  NC_000913/3543304‑3543441          |                                                                                                                                 gCTGGAGTCGAGCATCTTTATTGATGACGATCTGCGTGAAAGCGAGGCCGAGGTGCTGTGGGCGGTGAAAACGGAGCAAGGACCAGGATACATCTATTGTCTGATTGAACATCAAAg                       <  1:224193/117‑1 (MQ=255)          gAGCANNTTNNNTGNNGACGATCTGCGTGAAAGCTATTCNGATGTGCTGTGGTCGGTGAAAACAGAACANGNANCAGGNNACANCTATTGTCTGNTTGAACATCAAAGCACCTCAAACAAACTGATCGc  >  2:190166/1‑129 (MQ=255)          gAGCAGCTTTATTGATGACGATCTGCGTGAAAGCTATTCCGATGTGCTGTGGTTGGTTAAAACGGATCAAGGATCAGGATACATCTATTTTCTGATTGAACATCAAAGCTCCTCAAACAAACTGATCGc  <  1:190166/129‑1 (MQ=255)          |                                                                                                                                 GCTGGAGTCGAGCAGCTTTATTGATGACGATCTGCGTGAAAGCTATTCCGATGTGCTGTGGTCGGTGAAAACGGAACAAGGACCAGGATACATCTATTGTCTGATTGAACATCAAAGCACCTCAAACAAACTGATCGC  >  NC_000913/3543304‑3543441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑