| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,303,073 | Δ12 bp | coding (175‑186/921 nt) | oppB → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1303073 | 1303084 | 12 | 11 [0] | [0] 11 | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1303072 | 0 (0.000) | 11 (1.090) | 10/296 | 0.1 | 100% | coding (174/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| ? | NC_000913 | 1303085 = | 0 (0.000) | coding (187/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB | |||||
CATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGG > NC_000913/1302866‑1303279 | cATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGACAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtcc > 1:197196‑M1/1‑207 (MQ=255) ncaGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagc > 1:29196‑M1/2‑189 (MQ=255) gggCAATGTTAAAATTTATTCTAAGTCGCTGTCTGGAAGCGCTTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGCAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGACGGCCAGTATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacatgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtc > 1:209886‑M1/1‑179 (MQ=255) tCTACGTCGCTGTCTGGAAGCGATTCCGACTCTATTTAGTCTGAGTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCGTTTTACCGGAGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATAGCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcgggcaatgtcttgttttcatcc < 1:196525‑M1/250‑91 (MQ=255) gATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGCAGCCCTTTTACAGGCGAACGTACTTTACCGCCAGAAGGGATGGCCAATATCGAAACGAAATATCATCTTAATGATCCGtatttcagctacctgaaa > 1:179186‑M1/1‑139 (MQ=255) cGCTATTTATTCTTATTACTATTTCGTGCTTTATGATGCGCCTCGCGCCGGTAAGCCCTTTTACCGGCGAACGTACTTGACCGCCAGAAGTGATGGCCAATAACGAAGCGAAAGATCATCTGAATGAGCCGtatttcagctaccttaaacaacttgctcactgtgatttcggtcgatcgtttgaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagcc < 1:248869‑M1/251‑121 (MQ=255) cccTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAACCGAAATCTCATCTTAATGATCCGcatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaacataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagccgcagcatttttccttgcggtaatactg > 1:181348‑M1/1‑76 (MQ=255) ccTTTTACCGGCGAACGTACTTTACCGCCAGAAGCGATGGCCAATATCGACGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtcca > 1:97433‑M1/1‑75 (MQ=255) gTACTTTCCCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagccgcagcatttttccttgcggtaatactgggtgttagtgctggcgttattgccgcattaaaacaaaacaccaa > 1:72351‑M1/1‑59 (MQ=255) tACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtc < 1:6037‑M1/101‑44 (MQ=255) tAATGAGCCGtatttcagcgacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtgtctgccaaactgggatccgcagcatttttccttgcggtaatactgggtgtcattgctggcgttattgccgcattaaaacaaaacaccaaatgggactataccgtg < 1:115453‑M1/217‑208 (MQ=255) | CATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGG > NC_000913/1302866‑1303279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |