| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,052,722 | G→A | intergenic (+708/‑921) | yeeJ → / → shiA | inverse autotransporter adhesin/shikimate:H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,052,722 | 0 | G | A | 100.0% | 13.3 / NA | 7 | intergenic (+708/‑921) | yeeJ/shiA | inverse autotransporter adhesin/shikimate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (1/6); total (1/6) | |||||||||||
TATTATAACAATCCACTAATGCCCTGGCTTTATCTTCACCTTTGGGTCCATGAACGATCACTATTGGTATATCTGTTTCACTTTAAATTTTTGCTATTAGATTTTCTGCAATCGATAATGAAAATGTACGTTCCTGCGAGCTACCTTCTAAATTGAACGCAATGTAAGATCCTAACGATCGCATTTCCTCGCGCACCTCATCGAGTACATCCTCACTTAGTGGCAATTCATATATTGGCCTGACTGCTGGAAAACCCGCCTCACGCATCATAAATGCCCATGTCATAGGTACGGGAGCCCGGAGTTTCTGATCCATACTGGACGCGTTCTTGCACAAAGGGGAGAAGCAATTCATGGTTATACCAACAACCTGAAAATTCGTTTTTGCTTTC > NC_000913/2052542‑2052933 | tattatAACAATCCACTAATGCCCTGGCTTTATCTTCACCTTTGGGTCCATGAACGATCACTATTGGTATATCTGTTTCACTTTAAATTTTTGCTATTAGATTTTCTGCAATCGATAATGAAAATGTACGTTCCTGCGAGCTACCTTCTAAATTGAACGCAAGGTAAGATCCTAACGAGCACATTTCCTCGCGCACCTCTTCGAGTACATCCGCACTTAGTGGCAATTCATATATTGGCCTGACTGCTgg < 1:153777/250‑1 (MQ=255) tCACCTTTGGGTCCATGAACGATCACTAGTGGTATATCTGTTTCACTTTAAATTTTTGCTATTAGATTTTCTTCAATCGATAATGAAAAGGTACGTTCCTGCGAGCGACCTTCTAAATTGAACGCAATGTAATATCCTAACGATCACAGGTCTTCGCGCACCTCATCGAGTACATCCTCACTGATGGGCAATTCATATATTGGCCTGACTGCTTTAAAACCCGCCTCACGCATCATAAATGCCCATg < 1:167533/247‑1 (MQ=255) ttGGGTCCATGAACGATCACTATTGGTATATCCGTTTCACTTTAAATTTTTGCTATTAGATTTTCTGCAATCGATAATGAAAATGTACGTTCCTGCGAGCTACCTTCTAAATTGAACGCAATGTAAGATCCTAACGATCACATTTCCTCGCGCACCTCATCGAGTACATCCTCACTTAGTGGCAATTCATAGATTGGcn < 1:43550/199‑2 (MQ=255) gATAATGAAAATGTACGTTCCTGCGAGCTACCTTCTAAATTGAACGCAATGTAAGATCCTAACGATCACATTTCCTCGCGCACCTCATCGAGTACATCCTCACTTAGTGGCAATTCATATATTGGCCTGACTGCTGGAAAACCCGCCTCACGCATCATAAATGCCCATGTCATAGGTACGGGAGCCCGGAGTTTCTGATCCATACTGGACGCGTTCTTGCACAAAGGGGAGAAGCAATTCATGGTTATAcc < 1:85868/251‑1 (MQ=255) cGAGCTACCTTCTAAATTGAACGCAATGTAAGATCCTAACGATCACATTTCCTCGCGCACCTCATCGAGTACATCCTCACTTAGTGGCAATTCATATATTGGCCTGACTGCTGGAAATCCCGCCTCACGCATCATAAATGCCCATGTCATAGGTACGGGAGCCCGGAGTTTCTGATCCATACTGGAcg < 1:62786/188‑1 (MQ=255) cTAAATTGAACGCAATGTAAGATCCTAACGATCACATTTCCTCGCGCACCTCATCGAGTACATCCTCACTTAGTGGCAATTCATATATTGGCCTGACTGCTGGAAACCCCGCCTCACGCATCATAAATGCCCATGACAGAGGTACGGGAGCCTGGAGTTTCTGATCCATACTGGACGCGTTCGTGCACAAAGGGGAGAAGCAATTCAGGGTTATACCAACAACCTGAAAATTCGTTTTTGCTTTc < 1:85462/245‑1 (MQ=255) cTAAANTGNANGCNNTNTAAGNTCCTAACGATCACATTTCCTCGCGCACCTCATCGAGt > 2:85462/1‑59 (MQ=255) | TATTATAACAATCCACTAATGCCCTGGCTTTATCTTCACCTTTGGGTCCATGAACGATCACTATTGGTATATCTGTTTCACTTTAAATTTTTGCTATTAGATTTTCTGCAATCGATAATGAAAATGTACGTTCCTGCGAGCTACCTTCTAAATTGAACGCAATGTAAGATCCTAACGATCGCATTTCCTCGCGCACCTCATCGAGTACATCCTCACTTAGTGGCAATTCATATATTGGCCTGACTGCTGGAAAACCCGCCTCACGCATCATAAATGCCCATGTCATAGGTACGGGAGCCCGGAGTTTCTGATCCATACTGGACGCGTTCTTGCACAAAGGGGAGAAGCAATTCATGGTTATACCAACAACCTGAAAATTCGTTTTTGCTTTC > NC_000913/2052542‑2052933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |