| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 481,511 | G→A | L965F (CTT→TTT) | acrB ← | multidrug efflux pump RND permease AcrB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 481,511 | 0 | G | A | 100.0% | 18.9 / NA | 9 | L965F (CTT→TTT) | acrB | multidrug efflux pump RND permease AcrB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/4); total (5/4) | |||||||||||
GCCAGTACCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCGGACGTAAACGCATCCGCACCGCATCAAGCGTCGCTTCAATCAGACCTTTACCTTCTTTATCCATCAAGTCTTTGGCGAATTCGACGATAAGGATCGCGTTCTTCGCCGACAACCCAATGGTTGTGAGCAGGCCTACCTGGAAGTAAACGTCATTGGTCAGGCCACGGAAGGTGGCAGCCAGCAACGCACCGATAACCCCCAGCGGAACGACCAGCATAACGGAGAACGGAATCGACCAGCTCTCGTACAGCGCCGCCAGACACAGG > NC_000913/481351‑481749 | gCCAGTACCGTTGCGGTCACCATCCCGCCCATTACACCGGTCCCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCGGACGTAAACGCATCCGCACCGCATCAAACGTCGCTTCAATCAGACCTTTACCTTCTTTATCCATCAAGTCTTTGGCGAATTCGACGATAAGGATCGCGTTCTTCGCCGACAACCCAAt > 1:161690/1‑251 (MQ=255)gCCAGTACCGTTGCGGTCACCATCCCGCCCATTACACCAGTCCCTACTGCGTTCTGCGCGCCGGAACAAGCACCAGTACTGATAACCAGCGGCATAAAGCCGAGGATAAACGCCACCGAGGTCATCAGGATCGGACGTAAACGCATCCGCACCGCATCAAACGTCGCTTCAATCAGACCTTTACCTTCTTTCTCCATCAAGTCTTTGGCGAATTCGACGATAAGGATCGCGTTCTTCGCCGACAACCCAAt > 1:67894/1‑251 (MQ=255) ggTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCGGACGGAAACGCATCCGCACCGCATCAAACGTCGCGTCAATCAGACCGTTACCGGCTTGATCCATCAAGTCGTTGGCGAATTGGACGATAATGATCGCGTTCGTCGCCGACAACCCAATGGTTGTGAGCAGGc < 1:69020/251‑1 (MQ=255) cGGCATAACGCCAAGGATAAACGCCAGCGAGGTCATCAGGATCGGACGTAAACGCATCCGCACCGCATCAAACGTCGCTTCAATCAGACCTTTACCTTCTTTATCCATCAAGTCTTTGGCGAATTCGACGATAAGGATCGCGTTCTTCGCCGACAACCCAATGGTTGTGAGCAGGCCTACCTGGAAGTAAACGTCATTGGTCAGGCCACGGAAGGTGGCAGCCAGCAACGCACCGATAACCCCCAGCGGa > 1:692/1‑250 (MQ=255) gAGGATAAACGCCAGCGAGGTCATCAGGATCGGACGTAAACGCATCCGCACCGCATCAAACGTCGCTTCAATCAGACCTTTACCTTCTTTATCCATCAAGTCTTTGGCGAATTCGACGATAAGGATCGCGttcttc < 1:147293/136‑1 (MQ=255) aCGCCAGCGAGGTCATCAGGAGCGGACGTAAACGCATCCGCACCGCATCAAACGTCGCTTCAATCAGACCTTTACCTTCTTTATCCATc < 1:109645/89‑1 (MQ=255) gCCAGCGAGGTCATCAGGATCGGACGTAAACGCATCCGCACCGCATCAAACGTCGCTTCAATCAGACCTTTACCTTCTTTATCCATCAAGTCTTTGGCGAATTCGACGATAAGGATCGCGTTCTTCGCCGACAACCCAATGGTTGTGAGCAGGCCTACCTGGAAGTAAACGTCATTGGTc > 1:156989/1‑180 (MQ=255) cGCATCCGCACCGCATCAAACGTCGCTTCAATCAGACCTTAACCTTCTTTATCCATCCAGCCTTTAGCGAATTAGCCGATCTGGACCGCGTCCTTCGCCGACAACACAATGACAGTGAGCAAGCCTACCTGGAAGTAAACGTCCTAGGTCAGGCCACGGAAGGTGGCAGCCAGCAACGCACCGATAACCCCCAGCGGAACGACCAGCATAACGGAGAACGGAATCGACCAGCTCTCGTACAGCgccgcc > 1:96041/1‑249 (MQ=255) gccccgcaTCAAACGTCGCTTCAATCAGACCGTTACCTTCTTTATCCATCAAGTCTTTGGCGAATTCGTCGATAAGTATCGCGTTCTTCGCCGACAACCCAATGGTTGGGAGCAGGCCTTCCTGGAAGTAAACGTCATTGGTCAGGCCACGGAAGGTGGCAGCCAGCAACGCTCCGATAACCCCCAGCGCAACCACCAGCATAACGGAGAACGGAATCGACCAGCTCTCGTACAGCGCCGCCAGACACAgn < 1:29969/248‑2 (MQ=255) | GCCAGTACCGTTGCGGTCACCATCCCGCCCATTACACCGGTACCTACTGCGTTCTGCGCGCCGGAACCAGCACCAGTACTGATAACCAGCGGCATAACGCCGAGGATAAACGCCAGCGAGGTCATCAGGATCGGACGTAAACGCATCCGCACCGCATCAAGCGTCGCTTCAATCAGACCTTTACCTTCTTTATCCATCAAGTCTTTGGCGAATTCGACGATAAGGATCGCGTTCTTCGCCGACAACCCAATGGTTGTGAGCAGGCCTACCTGGAAGTAAACGTCATTGGTCAGGCCACGGAAGGTGGCAGCCAGCAACGCACCGATAACCCCCAGCGGAACGACCAGCATAACGGAGAACGGAATCGACCAGCTCTCGTACAGCGCCGCCAGACACAGG > NC_000913/481351‑481749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |