New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1469240	NA (NA)	8 (1.090)	6/312	0.1	100%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	1792772 =	0 (0.000)					intergenic (‑41/+37)	nlpC/btuD	NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit

CACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTG  >  NC_000913/1792534‑1793015                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                    ccagaggaataactggctggctgctacaccatggtgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaactattgcgatcttttcctgtgtggtacgccgtctgcgtttcgccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacgtatataagtgatattggttgtctggagattcagggggccagtctaGCGTCGTaattcc                                                                                                                                                                                                                                         <  1:163928‑M2/13‑3 (MQ=255)                                                      ccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgagattgggtgtctggagattcagggggccagtctaGCTTCGGAAGTACGCGACTTTCAAGATACGAATGAAATCAGATGGTCGAAGTCAGCATTCTGTGAc                                                                                                                                                                                    <  1:92803‑M2/66‑1 (MQ=255)                                                       cgtcatccccggttcaaagctctgctgaacaatcgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgtcctccgatgactaatctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGAcc                                                                                                                                                                                   <  1:172377‑M2/67‑1 (MQ=255)                                                           atccccggttcaaagctcttctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctgtagattcagtgggtcagtctaGCGTCGTAATTAc                                                                                                                                                                                                                                         <  1:35933‑M2/13‑1 (MQ=255)                                                                                           gatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTAcc                                                                                                                                                                                                                                        >  1:122741‑M2/149‑162 (MQ=255)                                                                                                                        gtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCcan                                                                                                                                                                       <  1:34444‑M2/79‑2 (MQ=255)                                                                                                                                                                                                           gatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACgg                                                                                                                                                                   >  1:13744‑M2/37‑119 (MQ=255)                                                                                                                                                                                                                                        cagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGCTGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTg  >  1:13152‑M2/8‑251 (MQ=255)                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                    CACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTG  >  NC_000913/1792534‑1793015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.