| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,135,255 | C→T | T176I (ACC→ATC) | flgG → | flagellar basal‑body rod protein FlgG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,135,255 | 0 | C | T | 98.7% | 236.1 / NA | 74 | T176I (ACC→ATC) | flgG | flagellar basal‑body rod protein FlgG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (40/33); minor base G (0/1); total (40/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
CGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTACGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCAAAAACTG > NC_000913/1135015‑1135499 | cgATTAAAGGGCAGGGCTGTTGCCAGGGGATTGTGCCAGATGGTTCATCAGCCTCTACCCGTGACGGCTCTTTCCAGGTGGATCAGATCGTGCAGCTGGTGGCTGCAGGTGGTGTTCAGGTGCAGCCAGTTATCACCAGTCCGGCTAATGCGTTAAGTATCGCTATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCATGTAGCTCCGGTTCAGGTGGGGCAGGTCAATCTCATCCCCTTTa < 2:413833/249‑1 (MQ=255) aaaGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTatgaatg > 2:295842/1‑250 (MQ=255) gcagggcTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCg < 2:411737/251‑1 (MQ=255) ccAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGACAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGc > 1:360516/1‑250 (MQ=255) gTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTgg > 1:563631/1‑251 (MQ=255) tGTTGCCAGATAGGTCAACAGCCTATACCCGTGACGGCTCTTTCCAGGTGGAGCAGAACGGGCAGCTGGAGACGGCTGGAGGTTTTCAGGTGCAGACAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGAGTGGTCAGCGGAACCCAAAAAGGCCAGGCAGCTCCGGATCCGGTTGGGCAGCACAATCTCATCACCTTTATGAATGACCCCGGGATGGAGAGCATGGGCGa > 2:227785/1‑250 (MQ=255) ccAGATGGTTCATCAGCCTATATCCGTGACGGCTCTTGCCAGGTGGATCAGAACGGGCTGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCAGCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACct < 2:284316/251‑1 (MQ=255) caaTGGTTCATCAGCCTATACCCATGACGGCTCTTTCCAGGTGGATCAGAACGGGCAACTGGTGACGGCTGGTGGGTTTCAGGTGCAACCAGCGATCCTCATTCCGGCGAATTGGTTTAGTATCACCATCGGTCATGACCGCGGTGTCACCGTAACCAAACAAGACCAGGCAGCACAGATTTAGGTTGGCCAGCTGAATCACATCACCTTTACGAATGAAACCGGGCTGGAGAGctgcggcgatagcttct > 2:509235/3‑235 (MQ=255) gTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACAcc > 1:522505/1‑251 (MQ=255) catcaGCCTATACCCGTGACGGATCTTTCCAGGAGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGCTTTCAGGTGCAGCCAGCGCTCACCATTCCGGCGAATGCGTTAAGTATCACCATCGCGCGTGATGGCGAGGTAATGGTACACAAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAACATCATCACCTTTCTGAACGACACCGGGATGGAGAGCGTTGACGAAAACctctccaacga > 2:408341/1‑243 (MQ=255) caGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACg < 2:169807/251‑1 (MQ=255) gCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGc > 1:503039/1‑250 (MQ=255) ccGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTg > 2:306590/1‑251 (MQ=255) cGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGCCACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTgg > 2:315194/1‑251 (MQ=255) gTGAAGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGCCTCGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTCCACCGAAACGCAATCCTCTGGt > 2:386177/1‑251 (MQ=255) aCGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGc > 1:396114/1‑250 (MQ=255) cgtctctTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTTGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCTCCATCGGTCGGGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACCCCGAAACGCAATCCTCTGGTGCAc < 2:335297/248‑1 (MQ=255) ggCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCAcc < 1:131868/251‑1 (MQ=255) ggCTCTTTCCAGGTGGAGCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTGCAGGTGCCGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGACAACCTCTACACCGAAACGCATTCCTCGGGTGCAcc < 2:493083/251‑1 (MQ=255) gCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACcg < 2:424413/251‑1 (MQ=255) gTGGATCAGAGCGGGCAGCGGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCGGGCGAATGCGTTAAGTATCACCATCGGTCGTCATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCGCCGGTGCAGGTTGGGCAGCGCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATGGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCAc < 2:294149/251‑1 (MQ=255) ggATCAGAACCGGCAGCTGGTGACGGCTGGGGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCCGGTTGGGCATCTCGATCTCATAACCTTTATGACTGACACCGGGCTGGAGAGCAGTGGCGAAAACCTCTACACAGAAACGCCATCCTCTGTTCCACCGAACGTAAGCACgt > 2:444201/1‑250 (MQ=255) cAGAACGGGCAGCGGGTGACGGATGGTGGTTTTCAGGTGCAGCCAGCGATCACCATGCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGGTCAGGTTGGGCAGCTCAATCTCATCACCTGTATGAATGACACCGGGCGGGAGAGCATTGGCGAAAACCTCTACACCTAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCggg < 1:609033/251‑1 (MQ=255) gggCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGa > 2:579403/1‑250 (MQ=255) ggCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAAc > 1:98161/1‑251 (MQ=255) ggCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAAGCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAAc < 2:38456/251‑1 (MQ=255) ggTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGcgcg < 1:295842/250‑1 (MQ=255) tGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCgggg > 1:25221/1‑250 (MQ=255) aCGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGACCGGCGCGGGAct < 2:360516/251‑1 (MQ=255) ggtTTTCAGGTGCAGCCAGCGATCTCCATTCCGGCGAATGCGTTAAGTATCACCATCGGGCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGTCTTGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGGCGGGCCTGAGCGGCGCGGGACTGCTGTATc < 2:616992/250‑1 (MQ=255) gtTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATAACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGTCGCGGGACTGCTGTATCa > 1:426135/1‑250 (MQ=255) tttCAGGTGCAGCCAGCGCTCACCATTCCGGCTAATGCGTTAAGTATCACCATCGGTCGTGCTGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCGCCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAg < 2:618433/250‑1 (MQ=255) cAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGt > 2:277349/1‑250 (MQ=255) gCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTg < 1:581170/251‑1 (MQ=255) gCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGAGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATNTTg > 2:609132/1‑251 (MQ=255) gccagcGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGGCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTTGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGaaa < 2:231209/251‑1 (MQ=255) agcGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGt > 2:39862/1‑251 (MQ=255) ccATTCCGGCGAATGCGTTAAGTACCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCCACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCGAGGGTATGTTGAAACGTCTAACGTc > 1:309059/1‑251 (MQ=255) aTTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCa > 1:585962/1‑250 (MQ=255) ccGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGc > 2:228546/1‑190 (MQ=255) ccGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGc < 1:228546/190‑1 (MQ=255) ggCGAATGCGTTAAGTATCACCCTCGGTCGTGATGGCGTGGTCAGAGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGgcgc > 2:428279/1‑204 (MQ=255) ggCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAAGCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGgcgc < 1:428279/204‑1 (MQ=255) gCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGc > 1:470312/1‑251 (MQ=255) ggAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCg < 2:98161/250‑1 (MQ=255) cGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGgaagaa < 1:306590/251‑1 (MQ=255) aGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGt < 1:80215/251‑1 (MQ=255) gTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTTGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTc < 2:88353/251‑1 (MQ=255) tATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTc > 1:140572/1‑250 (MQ=255) tCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATc > 2:137624/1‑201 (MQ=255) tCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATc < 1:137624/201‑1 (MQ=255) aCCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGTCATGCAGCTCCGGTTCAGGTTGGGCAGTTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGATAATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACTTCTAACGTCAACGTGGCGGAAGAACTGGTCAatat < 2:310710/251‑1 (MQ=255) cATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATg > 1:18318/1‑250 (MQ=255) cGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTc > 2:400303/1‑251 (MQ=255) gATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGga < 2:47881/224‑1 (MQ=255) gATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGga > 1:47881/1‑224 (MQ=255) ggCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTTCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAAc < 1:277349/250‑1 (MQ=255) tGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCt > 2:151817/1‑251 (MQ=255) cAGCGTAACCCAACAAGGACAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTatg > 1:503436/1‑249 (MQ=255) gCGTAACCCAACAAGGCCATGCAGCGCCGGTTCAGGTTTGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGCAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTTCTGTATCAAGGGTATGTTGAAACGGCTAACGTCAACGTGGCGGAAGACCTGGTCAATATGATTCAGGTGCAACGCGCTTATGaa < 1:167898/251‑1 (MQ=255) gTAAACCAACAAGGCCAGGCAGCTACGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCttttgaaat > 2:575427/1‑244 (MQ=255) aacaaGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGt < 1:119759/251‑1 (MQ=255) acaaGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAAAAGt > 1:25195/1‑250 (MQ=255) aGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAg < 2:563816/251‑1 (MQ=255) aGCTCCGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTCTGAAATCAACAGTAAAGCGGTGTcc > 1:637646/1‑250 (MQ=255) gCTCCGGTTCAGGTTGGGCAGCTCAAGCTCATCACCTTTATGAATGACACCGGGCTGGAGATCATTGGCGAAAACCTCTGCTCCTAAACTCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGTTATGTTGAAACGGCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACACGCTTATGAAATCAACAGTAAAGCGGTGTccac < 1:408341/251‑1 (MQ=255) ccGGTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAGCGGTGTCcaccac > 2:573837/1‑251 (MQ=255) cgtgtCAGGTTGGGCAGCTCAATCTCATCACCTGTATTAATGACACCGGGCTGGAGAGCATTGGAGAAAACCTCTACACCGAAACGCAATCCTCGGGTTCACCGAACGAAAGCACGCCGGGTCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGGCAACGTGGCGTAAGAACGGGTCAAGATGAGTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAGCGGTGTCCaccacc < 2:309059/247‑1 (MQ=255) gTTCAGGTTGGGCAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTCCACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATTAAATCAACAGTAAAGCGGTGTccaccccc < 1:227785/249‑4 (MQ=255) cAGCTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCa < 1:95974/251‑1 (MQ=255) cTCAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGaaaa > 2:227563/1‑250 (MQ=255) cAATCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCAAAAAc > 1:144504/1‑251 (MQ=255) cAATCTAATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGAGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCaaaaa > 2:95210/1‑250 (MQ=255) aTCTCATCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGAGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTATGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCAAAAACTg > 1:501547/1‑251 (MQ=255) | CGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTACGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCAAAAACTG > NC_000913/1135015‑1135499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |