| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,921,759 | C→T | S98N (AGC→AAC) | atpB ← | ATP synthase Fo complex subunit a |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,921,759 | 0 | C | T | 98.7% | 254.5 / NA | 77 | S98N (AGC→AAC) | atpB | ATP synthase Fo complex subunit a |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (40/36); minor base G (0/1); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCGTCAACTCTTTCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCAGCTGAAGGTTATTC > NC_000913/3921513‑3922004 | aGCGTCAACTCTTTCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTtttt > 1:277332/1‑251 (MQ=255) cGTCATCTCTTTCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGc < 2:125230/251‑1 (MQ=255) cGTCAACTCTTTCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGc > 1:28543/1‑251 (MQ=255) ttCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTa < 1:61085/248‑1 (MQ=255) ttCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACa < 2:56662/250‑1 (MQ=255) ttCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAACACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTAc < 1:384236/249‑1 (MQ=255) aaGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTACATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTATGCCATGGTACATGTCttt > 1:539909/1‑251 (MQ=255) gccgccGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCa < 1:415869/251‑1 (MQ=255) aTGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTAcc < 1:17717/251‑1 (MQ=255) aTGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGCCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTAcc > 2:503305/1‑251 (MQ=255) ttCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTa < 1:71618/249‑1 (MQ=255) tCATTTTGATGCTGTAGAACAGACTCAGGCTAAATAAGCCCAGTGCCATAGACAGCGCTACGTTCAAGTCTGCAGACGGACCCACACGCAGAGCAGGCAGACCCAGTACATGTTCAGCAATGTCCGGCAGCCGCTCGATAGGCAGTAACTCCATCAGGCTCATAAGGAATACCCAGACGAAGATCGTCAGGGCCAACAGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAAc > 2:46925/1‑250 (MQ=255) tCATTTTGAGGATGAAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAAc > 2:93772/1‑250 (MQ=255) aTTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTTCGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTTGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGTAGTAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACaaa < 1:257701/251‑1 (MQ=255) tttGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAg < 1:238529/250‑1 (MQ=255) tGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGCACATGTCTTTCACGCTACCATTAACAAAGCCg > 2:384084/1‑251 (MQ=255) gATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGTGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACCAAGCCgt > 2:332675/1‑250 (MQ=255) gATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCg > 2:325449/1‑250 (MQ=255) tGCTGTAGAACAGAATCAGGATAAATACGCCAAGAGACATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATc > 1:580884/1‑251 (MQ=255) gCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATGGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGATCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGNTc > 2:599337/1‑250 (MQ=255) gTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCa < 2:279634/251‑1 (MQ=255) gATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCt > 2:188105/1‑251 (MQ=255) aTAAATCCGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTg > 1:182980/1‑251 (MQ=255) aaaTACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGa < 1:325449/250‑1 (MQ=255) aCGCCCAGTGCCATAGACAGCGTTACGGTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGAACCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGACGATCACCAGCTCAATCGCGGTCTGAAACtt > 1:169647/1‑251 (MQ=255) cGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCCCAATCGCGGTCTGAAACtt > 2:651267/1‑250 (MQ=255) cGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCATTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACtt > 1:570828/1‑250 (MQ=255) gCCCAGTGCCATAGACAGCGTTACGTTCTCGTCCGCAGAAGGAACCACAAGCAGTGCAGGCAGAACCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGAGAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTTTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAAGCGCGGTCTGAAACTTAc < 2:175874/251‑1 (MQ=255) gCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGTTCACCAGCTCAATCGCGGTCTGAAACTTAc > 2:522670/1‑251 (MQ=255) ccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCt > 1:276473/1‑251 (MQ=255) cAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTg < 2:234167/251‑1 (MQ=255) aGTGCCATATACAGCGTTACGTTCACGTCCGCAGACGGACCCACCCGCATTGCAGGCAGACCCAGTACACGTTCAGCAATGTCCGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGTAATCAGCTTGTTTTTGCCATGGTACATGTCTCTCACACTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTgg < 2:417193/251‑1 (MQ=255) aTAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACAcc > 1:425415/1‑251 (MQ=255) aTAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTAAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATACATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGATTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACATGGCACAcc > 1:327525/1‑251 (MQ=255) gACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTTCCTGGCACACCGCt < 2:277332/251‑1 (MQ=255) cAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTgg > 1:383724/1‑251 (MQ=255) cAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTgg < 1:174634/251‑1 (MQ=255) tCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACGCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCttttt < 2:169647/250‑1 (MQ=255) cGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgct > 2:9506/1‑251 (MQ=255) ccGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgctacg > 2:433872/1‑251 (MQ=255) cAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATcgc < 1:540607/202‑1 (MQ=255) cAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATcgc > 2:540607/1‑202 (MQ=255) cacaCGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATaaaa < 1:169443/251‑1 (MQ=255) cacGCAGTGCAGGCAGAACCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACAACGCTGGTCGCCTTTTTGGCTACGCTACGGAATaaacc > 1:194100/1‑248 (MQ=255) aGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGa > 1:85476/1‑250 (MQ=255) gaggcagAACCAGTCCATGTTCAGCAATGTACGGCAGCAGGTCCATAGGCAGTAAATCCATCAGGTTCCTCAGGAATACCCAGTCGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTATTTTTGCCATGGTACATGTCTTGCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCTCGGTCTGAAACTTACCTGGCACACCGCTGGTTGCCTTTTTGGCTACCCTACGGAATAAAACCAGGaacaac < 2:574860/250‑1 (MQ=255) gcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCATGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACTCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACt < 2:303566/189‑1 (MQ=255) gcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACt > 1:303566/1‑189 (MQ=255) gcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGaacaac > 1:185098/1‑248 (MQ=255) cagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGATCAATCGCGGTCTGAAACTTACATGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGAc > 1:327138/1‑251 (MQ=255) gTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCg > 2:486394/1‑249 (MQ=255) tCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCgaga < 2:28543/250‑1 (MQ=255) ggCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTc < 1:503305/251‑1 (MQ=255) cagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAatat < 1:486394/251‑1 (MQ=255) ggTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATattg > 1:318350/1‑251 (MQ=255) gATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGTCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATattgattg < 1:65/251‑1 (MQ=255) aTAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCATTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGt < 2:570828/251‑1 (MQ=255) aTAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAAGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGTAATAACACCAGGCACAACAGACCCAGCACCACCGAGCAGCACATGGAGTCAATATTGCTTGt > 2:474833/1‑251 (MQ=255) gTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGa > 1:189938/1‑249 (MQ=255) aaTCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTg < 2:517104/251‑1 (MQ=255) cATNAGGTTCATCAGGAATACCCATACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAAGCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTg < 2:607967/251‑1 (MQ=255) cAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTggg < 1:188105/250‑1 (MQ=255) ggTTCATCAGGAATACCCAGACGAAGAACGTCAGGGCTAGCGGAGCAATCAGCTTGTTTTTGCCATGGCACATGCCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTTGCTACGCTACGGAATAAAACCAGGAACAACAAACCCAGCACCACCGAGAAGAAAATGGAGTCAATATTGAATGTCCAGAAGGCGGCAgggggg > 2:235192/1‑251 (MQ=255) atcaGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTtg > 2:289472/1‑251 (MQ=255) aGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTgg > 1:309375/1‑251 (MQ=255) ggAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTgg > 1:151792/1‑250 (MQ=255) ggAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGGCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGa < 1:211750/251‑1 (MQ=255) ccAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATccacca < 1:384084/251‑1 (MQ=255) gACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCg < 1:60973/251‑1 (MQ=255) aCGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCAAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCga < 1:332675/251‑1 (MQ=255) aGGGCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATGAATTGTCCAGAAGGTGGCTGGGGGGTTTTGGGGATCCACCAGCGAGAATGTACGc > 2:167010/1‑249 (MQ=255) gCCAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTc < 1:257086/251‑1 (MQ=255) cAGCGGAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCa < 2:189938/251‑1 (MQ=255) gggAGCAATCAGCTTGGTTTTGCCATGGTACATGTCTGTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCAGCt < 2:5704/250‑1 (MQ=255) gAGCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCAGCTg > 1:144460/1‑250 (MQ=255) gCAATCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCAGCTGa > 1:207816/1‑249 (MQ=255) aaTCAGCTTGTTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCAGCTGAAGGt < 2:144460/251‑1 (MQ=255) cttgtttTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCAGCTGAAGGTTATTc > 1:181076/1‑250 (MQ=255) | AGCGTCAACTCTTTCGTGAAGCCGCCGATGCCTTTCATTTTGATGCTGTAGAACAGAATCAGGATAAATACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAACCAGGAACAACAGACCCAGCACCACCGAGAAGAACATGGAGTCAATATTGATTGTCCAGAAGGTGGCTGGGGGGTTTTGTGGATCCACCAGCGAGAATGTACGCAGGTCCAGCTGAAGGTTATTC > NC_000913/3921513‑3922004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |