| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,782,932 | C→T | A244T (GCG→ACG) | gpsA ← | glycerol‑3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,782,932 | 0 | C | T | 90.6% | 125.6 / ‑6.2 | 58 | A244T (GCG→ACG) | gpsA | glycerol‑3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (4/0); major base T (21/27); minor base G (5/0); total (30/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GCCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGC > NC_000913/3782702‑3783172 | cgcgTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACCGGTTGTCGGTACAGGTAAGCACCAAAACGCCAAACCCC‑CGCAAGACCA‑TAAA‑GGGGGc > 2:416105/1‑249 (MQ=255) tCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCa < 1:572454/250‑1 (MQ=255) aCTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCAcc < 1:416105/251‑1 (MQ=255) tAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGGCTGGGTGTCGGTACAGGGAAGCACCAGATCGCCAAACCCC‑GTCATGCCCA‑TAAA‑GGTGGGAGGGGCGGCACCCAGCGCC‑GCCACAAGAcc > 1:345755/1‑250 (MQ=255) tAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACCCGGCTGGTTGCCGGGACAGGTAAGAACCAAACTGCCAAGCCCC‑CGCATGTCCC‑TAAA‑GGTGGCAGGGGCGGCACCCAACGCC‑CCACCCAGAcg > 1:637597/1‑251 (MQ=255) cGGTTATTGGCATTTCAACGCCTAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCTGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGCGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCTGTACATGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GTTGGCATGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTc < 2:221024/250‑1 (MQ=255) ggTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTAAACGACTGGTTGTCGGGACAGGGAAGCACCAAAACGCCAAACCCC‑CCCACGTCCA‑TAAA‑AGTGGCGGGGGGGGCGCCCCGCGCC‑GCACCAAGACACCAC‑ATTTcac > 2:173244/1‑250 (MQ=255) aTTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACCCGACTGGTTGTCGGGACAGGTAAGCCACACATCGCCAAGCCCC‑GTCATGCCCC‑TAAA‑AGTGGCAGGGGCGGCACCCAGCGCC‑GCCCCCAGACGCGCC‑ATTTcaggccg > 1:254389/1‑247 (MQ=255) aTTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGCAGCCTTCCAACACCTGACCAATCTTCTCCTGCGCGCTTTGTACATACATGCACTGACCGAGCATCATGCCAAAACGGCGGATAAGCGAATCGTTGTTGGTAAAGGAAAGCACCAGAAAGCCAAGCCCC‑CCCATGCCCAACAAG‑GGGGGCAGGG‑CGGCACCCCGCGCC‑GCACCCACACGCCAC‑ATTTcagaccc > 1:417647/1‑247 (MQ=255) aTTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCCGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACg < 1:467966/251‑1 (MQ=255) ttCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACgg < 1:538951/250‑1 (MQ=255) aaCGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGa < 1:148023/251‑1 (MQ=255) ccGAAGCGATGCGCAAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACACGACCGGTTGTGCGTACAGGGTAGAACCAGAACGCCCTGCCCCCGCC‑TTCCCC‑CAAA‑GGGGGGAGGGGCGGGACACCGCCCC‑GCACCAAGACGGGAC‑AATTTAGCCAGCCCACGGGTggtacg > 2:498346/1‑246 (MQ=255) aGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAAAGGCGGTTAACCCACTGGGTGTCGGTACAGGGAAGCACCAGATCGCCAAACCCC‑GTCCTGCCCA‑TAAAAGGAGCCAGG‑TAGGCCCCCCGCGCC‑GCCCCCAGACGCGAC‑ATTTCAACCCACCCCCAGGCGATCAGCGcc > 1:621590/1‑251 (MQ=255) ttcttTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACCGGTTGTTGGGACAGGTAAGCACCAGAAAGCCAAGCCCC‑GGCATGCCCA‑TAAA‑ATGGGCAGGGGCGGCACCCAGCGCC‑CCACCAAAACGCGCC‑ATTTTAACCCGCCCACGGGGGATTCGCCCCGTTCGCGCAtttcccccaaaac > 1:234519/1‑240 (MQ=255) tcttTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAAc < 1:36247/250‑1 (MQ=255) tCGTATTGCGGTAGCCATCCACCACCTGACCAATCTTCTCCTGCGCGCTGTGTTCATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCACCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCATCCCACGGGTGATCAGGGGCGTACGCGCATTCGCTC‑CAAATCCGAt < 2:76680/250‑1 (MQ=255) gTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTCAGCGACTGGGTGTCGGGACAGGTAAGGACCCAAACGCCAAACCCC‑GTCATGCCCA‑TAAA‑AGTGGGACGGGCGGCACCCACCGCC‑GCACCAACACGCCAA‑CTTTCAGACAGCCCCCCGGGGATAAGCGCCGTAcgccgattccccacaaaaccgcaacc > 2:209070/1‑228 (MQ=255) tATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCCAGCCCC‑GTCATGCCCA‑TAAA‑AGGGGCAGGGGCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑AATTCAGCCAGCCCCCGGGGGATTAGCGGCGGTCGCGCATTCGCCC‑CAAAAcccgtaccc > 1:179162/1‑244 (MQ=255) tGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTc < 2:107584/250‑1 (MQ=255) tGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCGTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTGACGCGACGGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTc < 2:621590/250‑1 (MQ=255) cGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTAAGCGACTGGTTGTCGGTAAAGGTAAGCACCAGAACGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGGGGCAGGGGCGGCACCCAGCGCC‑GCACCAAGAAGAGAC‑ATTTTAGCCAGCCCACGGGTGATCAGCGCAGGACGCGCCATCGCAC‑CCAAAACGATACCGTCggg > 1:452564/1‑250 (MQ=255) ggTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCAGGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGAc < 2:581733/251‑1 (MQ=255) tAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTTGGGACAGGGAAGAACCAAATCGCCAAGCCCC‑GTCAAGCCCA‑TAAA‑GGTGGCAGGGGCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTTAGCCAGCCCACGGGGGGTCAGCGCCGGACGCGCATTCGCAC‑CAAAACCCAAACCGTCGGACac > 1:564812/1‑250 (MQ=255) gCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCCACTGGTTGTCGGTACAGGGGAGCACCAAAACGCCCACCCCC‑GTCATGCCCA‑TAAA‑GGTGGGCGGGGCGGCACCCCGCCCC‑GCCCCAAGACGCGACCATTT‑AACCAGCCCACGGGGGATCAACGCCCCACGCCCCTTCCCAC‑CCAAACCCATACCCCCGGACATcc > 2:258962/1‑251 (MQ=255) ccTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATccc < 1:3273/251‑1 (MQ=255) ccTNCCACCCCCTGACCAATCTCCTCCGGCGCGCTTTGTACATCCATGCCCGGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCTTTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATGCGCAC‑CAATACCGATACCGTCGGACATccc < 2:590993/251‑1 (MQ=255) cTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACTCGACCGGTTGTCGGTACAGGTAAGCACCCGATCGCCAAGCCCC‑CTCATGCCCC‑TAAAAGGGGGC‑GGGTCGGCACCCAGCGCC‑GCCCCAAAACGCGAC‑ATTTCAGCCAGCCCCCGGGTGATCAGCGCCGTACGCGCCTTCGCCC‑CCACACCCATACCCGCGGACATcccc > 1:317950/1‑251 (MQ=255) cTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAACCCC‑GTCATGCCCC‑TAAA‑GGGGGCAGGGGCGGCACCCAACGCC‑GCACCAAGACGCGAC‑AATTCAGCCAGCCCACGGGGGGTCAACGCCGGACGCGCATTCCCAC‑CAAAACCCATACAGTCGGACATcccc > 1:650556/1‑251 (MQ=255) ccaccTGACCAAGCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCa < 1:192911/251‑1 (MQ=255) caccTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCaa < 1:168947/251‑1 (MQ=255) aCCAATCTTCTCCTGCGCTCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCaa < 2:435706/251‑1 (MQ=255) aTCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTAACCGGCTGGGTGTCGGGACAGGGAAGCACCAGATCCCCAAGCCCC‑GCCATGGCCC‑TAAA‑GATGGGCGGGGAGGCACCCAGCGCC‑GCACCAAAACACGAC‑ATTTCAGCCAGCCCCCGGGGGATCAACGCCGGACACGCATTTGCAC‑CCAAACCGAAAACGTCGGACAAcccccccaccaaggacataac > 1:325084/1‑234 (MQ=255) cccccgcgcgcTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGtttt < 1:106005/246‑1 (MQ=255) gcgcgcTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCa < 1:209070/249‑1 (MQ=255) cgcgcTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACcg < 2:345755/251‑1 (MQ=255) ccATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAg < 2:68366/250‑1 (MQ=255) aTCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACCCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAACCCC‑CTCATGCCCC‑TAAA‑AGTGGCAGGGTGGGCACCCCGCGCC‑GCACCCAAACGCGAC‑ATTTCAGCCCGCCCACCGGTGATCCGCGCCGTACGCGCATTCGCCC‑CCAAACCGATACCGTCGGACATCCCCCCACCAATGGCAATAAAGATTTTCAccccccccccaaccc > 1:571868/1‑238 (MQ=255) cccTGCCCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTGGGCGGGACAGGTAAGCACCAGAACGCCAAGACCC‑GGCATGGCCA‑TAAA‑GGGGGCAGGGACGGCCCCCAGCGCC‑GCACCAAGACGCGGA‑ATTTCAACCAGCCCACGGGCGATCAGCGCCGTACGCGCATTCGCCC‑CAAAACCGCAAACGCCGGACCTACCCCCAACAAAGGGAATAACGTTTTTCAccaccgccccaaagtgccaacc > 1:498087/1‑231 (MQ=255) ccTGACCGAGCATCATGCCAAAACGGCGGGTACGCGACCGGTTGTTGGGAAAGGGAAGCAACAGAACACCAAGCCCC‑CTTCTGTCCC‑TAAA‑AGGGGCAGGGGCGGCACCCAGCGCC‑GCACCAAAACGCGAA‑CTTTTTGCCAGCCCCCGGGGGGTCAGGGCCGAACCCGCCTTCGCCC‑CCAAACCCAAAGCGGCGGCCATCCCCGCACCAATGGCAATAAAGTTTTTTACCCCGCCGCCAAGCAGCAAGcc > 1:325840/1‑250 (MQ=255) tGACCGAGCATCATGCCAAAACGGCGGTTAACCGGCTCGCTGTCGGGGCAGGTAAGCAACAAAACGGCAAACCCC‑GGCCTGCCCC‑CAAA‑AGCGGCAGGGTCGGCACCCCCCGCCCGC‑CCAAGACCCGAC‑ATTTCAACCCGCCCCAGGGCGATCCGCGCCGTCCGCGCATTTTCAC‑CCCAACCGACAACGCCGGAAATCCCCCCACCAATGGCAAATACCTTTTTCCCCGCGCCCCCCAGCTGCACCCCaa > 2:133916/1‑250 (MQ=255) atcatGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCgg < 2:551229/251‑1 (MQ=255) cctgacgtttcgcgacctgTTGTCGGTTCAGGTAAGCCCCAGTTCGCCCAGTCCC‑GACATGCCCA‑TAAA‑GGTGGCAGGGTCGTCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGTTGAGCGGCGCCGTACGCTCATTCG‑ACGCAAAACCGATACCGTCGGACACCCCCGCACCAATGGCAATTACGTTTTTCATTGCTCCGCCAAGCTGCACTCCAATTAAATCCGGTTGGCTGtcaa < 2:237072/233‑4 (MQ=255) cggcggTTACACGACTGGTTGTCGGTACAGGTAAGCACCAAAACGCCAAGCCCC‑GTCATGCCCC‑TAAA‑GGGGGCAGGGGCGGCACCCCGCGCC‑GCACCCAGACGCGAC‑ATTTCAGCCCGCCCCCGGGGGATCAGCGCCGCACGCGCATTCGCAC‑CAAAACCCCTACCGGCGGACATCCCCCCCCCAATGGCAATAACGTTTTTCACCGCGCCGCCCAGCTGCCCGCCAATGAAATCCGGATTGCttgtaac > 2:571273/1‑245 (MQ=255) gcgACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGGGGCAGGGTCGGCACCCAGCGCC‑TCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCCTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACtt < 1:621920/251‑1 (MQ=255) cgACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGCGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCCATGGCAATAACGTTTTTCACCGCCCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACttt > 1:285292/1‑251 (MQ=255) tGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGcc > 1:386593/1‑251 (MQ=255) cGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgc > 2:384394/1‑251 (MQ=255) aCAGGTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTgcagca < 1:388128/251‑1 (MQ=255) ggTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAgct < 1:611/251‑1 (MQ=255) ggTAAGCACCAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAgct < 1:258962/251‑1 (MQ=255) gTAAGCACCAGATCTCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAgctg < 1:385761/251‑1 (MQ=255) tAAGCACCAGATCGCCAAGCCCC‑ATCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGGGCAGCAgctgc > 2:160093/1‑251 (MQ=255) ccAGATCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGATGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCGGGATTGCGGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTgggg > 1:125877/1‑248 (MQ=255) aGATCGCCACGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGatc < 2:487322/251‑1 (MQ=255) aTCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGatcat > 2:550760/1‑251 (MQ=255) tCGCCAAGCCCC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGatcatc > 1:130426/1‑251 (MQ=255) ccAAGCCAC‑GTCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGAGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGc > 2:424659/1‑251 (MQ=255) | CGCGTTTTTTCCGCAATATAATACTTGATAAATTTCCTCGGTTATTGGCATTTCAACGCCGAAGCGATGCGCCAGTTCGCGGACTTCTTTCGTATTGCGGTAGCCTTCCACCACCTGACCAATCTTCTCCTGCGCGCTTTGTACATCCATGCCCTGACCGAGCATCATGCCAAAACGGCGGTTACGCGACTGGTTGTCGGTACAGGTAAGCACCAGATCGCCAAGCCCC‑GCCATGCCCA‑TAAA‑GGTGGCAGGGTCGGCACCCAGCGCC‑GCACCAAGACGCGAC‑ATTTCAGCCAGCCCACGGGTGATCAGCGCCGTACGCGCATTCGCAC‑CAAAACCGATACCGTCGGACATCCCCGCACCAATGGCAATAACGTTTTTCACCGCGCCGCCAAGCTGCACGCCAATGAAATCCGGATTGCTGTAAACGCGGAAACTTTTGCCGCAGTGCAGCAGCTGCTGGAGATCATCGGC > NC_000913/3782702‑3783172 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |