| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,115,607 | G→A | T1169I (ACC→ATC) | yghJ ← | putative lipoprotein YghJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,115,607 | 0 | G | A | 98.7% | 255.2 / NA | 76 | T1169I (ACC→ATC) | yghJ | putative lipoprotein YghJ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (38/37); minor base C (1/0); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
AAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGGTGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAGCCGGTGCCCACAG > NC_000913/3115363‑3115851 | aaaCATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGTCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGGGCCAGTGAGTTCAGATCGTTTTTCCAGGCGCGGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGc < 1:628192/251‑1 (MQ=255)aaaCATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGc > 1:439870/1‑251 (MQ=255) aCATCCTGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTg < 1:105742/251‑1 (MQ=255) tCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGc > 1:292157/1‑250 (MQ=255) cTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCAt > 2:615103/1‑251 (MQ=255) cccGTCTTCGCTCTCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTg < 2:435637/249‑1 (MQ=255) tCTTCGCTATCACGGACGTAGAAGTCATTCATCGAGCTGACAAAGGTATCCAGATAGTTAGCGAATTCCTCCAGTCCGACAGCGTAATTGATGGAATTCAGGATCTTCTTCGGTGTGGGATAGACGAAAGCGTCTGATTCCAGCTAACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGNagg > 2:609160/1‑250 (MQ=255) cTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTag > 1:89840/1‑249 (MQ=255) tCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGAGCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTagag < 1:63801/249‑1 (MQ=255) cGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCt < 1:578954/250‑1 (MQ=255) aTCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTg < 1:222204/250‑1 (MQ=255) gAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCAtt < 1:524636/225‑1 (MQ=255) gAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCAtt > 2:524636/1‑225 (MQ=255) catCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCAc < 1:119099/251‑1 (MQ=255) gAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGATCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGt > 2:423767/1‑250 (MQ=255) gtgaaaGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTGCCATGCGCCGTCTTTATAGAACGTTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATGCATTGGTAGAGCTATTGCCCTTGATATAAATCATGCCACCGGAAGGc < 2:32461/247‑1 (MQ=255) cAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCCGGTTCTTCTTCGGAGTGGTATAGACGAAAGCGTCTGATTACAGCTCACCCAACGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGCGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTAGTAGAGCTATTGCCCTTGATATAAATCAGGCAACCGTAAGGCAcc > 1:636882/1‑251 (MQ=255) aTCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACt < 2:64183/251‑1 (MQ=255) tAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTAc > 1:321058/1‑249 (MQ=255) aGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTAGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGc > 1:2268/1‑251 (MQ=255) tGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTc > 1:565964/1‑251 (MQ=255) ccAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTcc > 2:80158/1‑248 (MQ=255) gCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACg > 1:91899/1‑251 (MQ=255) tgtAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATAGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGCGAGTACGtntt > 2:595597/1‑250 (MQ=255) aTTCAAGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTACAGATAACCCAGCGGCGCCAGTGAGTTCAGATCGATTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATGAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCg > 2:372607/1‑251 (MQ=255) cttcttcGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTAt < 2:541767/152‑1 (MQ=255) cttcttcGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTAt > 1:541767/1‑152 (MQ=255) tcttcGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGGACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCa < 1:620008/249‑1 (MQ=255) ggTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCa < 1:319295/250‑1 (MQ=255) ggTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCAt < 1:469844/251‑1 (MQ=255) ataGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCt < 1:415382/251‑1 (MQ=255) ataGACGAAAGCGTCTCATTCCAGCTCACCCAGCGGAGCCAGTGCGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCCCTCTTGGCGGACGGTTCAGCGAAACTTCATGCt > 2:640764/1‑251 (MQ=255) aGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTc < 1:553496/196‑1 (MQ=255) aGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTc > 2:553496/1‑196 (MQ=255) aCGAAAGCCTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGTCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTTATATAAATCAGGCCACCGTTAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGAGGACGCTTCAGCGCAACTTCATGCTtctc < 2:421154/251‑1 (MQ=255) gAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCAc < 1:347528/251‑1 (MQ=255) aaaGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCCCGCCAGTCAAGATGAAGATGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAAATTCACCGTACCGCTAGCGTCCAGCGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTACTGCTTATCACg > 2:410258/1‑251 (MQ=255) aGCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTc > 1:545383/1‑251 (MQ=255) gCGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTcc > 1:431408/1‑251 (MQ=255) cGTCTGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCg > 1:338163/1‑251 (MQ=255) cGTCGGATTCCAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCTTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCg < 2:134969/251‑1 (MQ=255) cAGCTCACCCAGCGGAGCCAGTGCGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACgg > 2:77784/1‑211 (MQ=255) cAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACgg < 1:77784/211‑1 (MQ=255) cAGCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGgtcgt < 1:121101/251‑1 (MQ=255) gCTCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTca < 2:439870/251‑1 (MQ=255) tCACCCAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTcagc > 1:550359/1‑251 (MQ=255) cccAGCGGAGCCAGTGAGTTCAGCTCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTcagcc > 2:276187/1‑249 (MQ=255) ccAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGt < 2:165185/187‑1 (MQ=255) ccAGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGt > 1:165185/1‑187 (MQ=255) aGCGGAGCCAGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAgcgc > 2:212822/1‑251 (MQ=255) cagTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTg > 1:245015/3‑250 (MQ=255) gTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACTTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTca < 1:634634/251‑1 (MQ=255) gATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAgg > 1:362231/1‑250 (MQ=255) gTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAg < 2:135733/245‑1 (MQ=255) gTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAg > 1:135733/1‑245 (MQ=255) gTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGt < 1:396902/251‑1 (MQ=255) tttCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTc < 1:595597/250‑1 (MQ=255) ccATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGCTGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCAACGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCTAGAGAGCACGGTTTAGTCACTCTTGGCGGACGGTTCAGCGCCACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACTGGCACGTTCGCAt > 2:148451/1‑251 (MQ=255) ccATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCAt < 2:486739/251‑1 (MQ=255) aTGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTg > 1:213006/1‑251 (MQ=255) ccGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGGAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTT‑GTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACtt > 1:232255/1‑250 (MQ=255) ttATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATgg < 2:409029/250‑1 (MQ=255) ttATAGAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATg < 2:362231/249‑1 (MQ=255) gAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACct > 1:251441/1‑251 (MQ=255) gAACGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACct < 1:80158/251‑1 (MQ=255) aaCGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACctc > 2:15221/1‑251 (MQ=255) cGGTGCTTTTACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCtt > 1:441767/1‑251 (MQ=255) ttttACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTg > 1:267172/1‑249 (MQ=255) tttACCACGTCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAg < 2:292157/250‑1 (MQ=255) tACCACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTATTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAGcc < 2:550359/250‑1 (MQ=255) ccACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACTGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCGCGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAGCCGGt < 1:392031/251‑1 (MQ=255) ccACGCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAGCCGGt > 2:45428/1‑251 (MQ=255) gCCAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAGCCGGTGccc < 2:89840/251‑1 (MQ=255) ccAGTAAAGATGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAGCCGGTGCCca < 2:522106/251‑1 (MQ=255) aGTAAAGATGAAGCTGGCAGAGTCATTGGTAGAGCTATTGTCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACGTCACCGTACCGCTAGCGACCAGAGAGTACGTTGTAGTCACTCTTGGCGGACGGTTCAGCGCAATTTCATGCTTCGCACGTCCGTTCAGGTCGTCAGCCAGCGCCACGGTGACTGTCACAGGAACTTTCGCATTGGACTTAATGGGGACGTCTTGCTGAGCCGGTGCCcaca < 2:62738/251‑1 (MQ=255) gTAAAGATGAAGCAGGGAGATTCATTGGTAGAGCTATTGCCCATGATATAAATCAGGACACCGTAAGGCACCTTGAACTTCACCGTACCGCTAAAGTCCAGCGCGTACGATTTAGACACTCCTGTCGGAAGGTTCAGCGCAACTTCATGCTCCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGCTGACGGTCACAGGAACGTTCGCATTGGACTCATTGGCGATCTCTTTCCGCGCAGGTGccccacg > 2:351821/1‑247 (MQ=255) | AAACATCCGGTGCTTACCGTCTTCGCTATCACGGCCGTAGAAGTCATTCATCGAGCTGGCAAAGGTATCCAGATCGTTAGCGAATTGCTCCAGTCCGCCAGTGTAATTGCTGGCATTCAGGTTCTTCTTCGGTGTGGTATAGACGAAAGCGTCTGATTCCAGCTCACCCAGCGGAGCCGGTGAGTTCAGATCGTTTTTCCATGCGCCGTCTTTATAGAACGGTGCTTTTACCACGCCAGTAAAGGTGAAGCTGGCAGATTCATTGGTAGAGCTATTGCCCTTGATATAAATCAGGCCACCGTAAGGCACCTTGAACTTCACCGTACCGCTAGCGTCCAGAGAGTACGTTTTAGTCACTCTTGGCGGACGGTTCAGCGCAACTTCATGCTTCTCACGTCCGGTCAGGTCGTCAGCCAGCGCCACGGTGACGGTCACAGGAACGTTCGCATTGGACTTAATGGTGACCTCTTTCTGAGCCGGTGCCCACAG > NC_000913/3115363‑3115851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |