Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,970,990	C→T	intergenic (‑6/+40)	tap ← / ← tar	methyl‑accepting chemotaxis protein Tap/methyl‑accepting chemotaxis protein Tar

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,970,990	0	C	T	100.0%	190.4 / NA	55	intergenic (‑6/+40)	tap/tar	methyl‑accepting chemotaxis protein Tap/methyl‑accepting chemotaxis protein Tar
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (31/24);  total (31/24)

CGCCGGATAGCTAAGTGCCGTCAGAGTGCCCGCTTTGTTCAGCGCGGTACTGGCCTGTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGCTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCCAGCGCAGCGGCGGCGGCAGCTGATTCCTGCACCAGCGATGC  >  NC_000913/1970745‑1971236                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       cgccgGATAGCTAAGTGCCGTCAGAGTGCCCGCTTTGTTCAGCGCGGTACTGGCCTGTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTcccc                                                                                                                                                                                                                                                   >  2:528710/1‑251 (MQ=255)           cTAAGTGCCGTAAGAGTGCCCGCTTTGTTCAGCGCGGTACTGGCCTGTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAggcggc                                                                                                                                                                                                                                         >  2:275689/1‑251 (MQ=255)              aGTGCCGTCAGAGTGCCCGCTTTGTTCAGCGCGGTACTGGCCTGTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGGTTAAACATCAACGTTCCCCATCAGGCGGCAAt                                                                                                                                                                                                                                      >  1:306677/1‑251 (MQ=255)                  ccGTAAGAGTGCCCCCTTTGTACAGCGGGGTACTGGCCTGTAACATTCCCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGTTTCCTCTGCTCGACCCGATTCAGTGGTGGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGAcc                                                                                                                                                                                                                                  <  1:356412/251‑1 (MQ=255)                        gagTGCCCGCTTTGTTCAGCGCGGTACTGGCCTGTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGtt                                                                                                                                                                                                                             >  2:6759/1‑250 (MQ=255)                         ggTGCCCGCTTTGTTCAGCGCGGTACTGGCCTGTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAg                                                                                                                                                                                                                           <  1:13511/250‑1 (MQ=255)                                        cAGCGGGGTCCTGGCCTGAAAAATTACCGCCCGAGTTGGCGCTAATGCCGCCCGTTGCTGATTGCTCTTCTCGACCTGATTCAGTCGTTGCAAATCGCCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCaa                                                                                                                                                                                                             <  2:56697/250‑1 (MQ=255)                                              ggTACTGGCCTGTAACATTACCGCCCGAGTTTGCTCTAATGCCGCACGTTGCTGATTTCTCTGCTCGACCTGATTCAGTTGTTGCAAATCGTCGCAAAATGCACAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGttt                                                                                                                                                                                                      <  2:135630/251‑1 (MQ=255)                                                 aCTGGCCTGTAACATTACCGCCCGATTTGGCGCTAATGCCGCACGTTGCTGTTTGCTCTGCTCAACCTTATTCAGTCGTTTCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTcc                                                                                                                                                                                                    <  1:613179/250‑1 (MQ=255)                                                         gTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGCCCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGGGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCGATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTgg                                                                                                                                                                                            >  2:245897/1‑250 (MQ=255)                                                              aTTACGGCCAGAGTATGCACTAATGCCGCCCGTTGCGGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATAGTCGCGAACTGCCCACAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTACTCGCAATTCGAATACGATAAAACATCAACGTTCAGCCTCAGGCGGCAATGACAGCGTTAGTACATACTCGTCAAAATACTTCCCAGTATGGacct                                                                                                                                                                                        >  2:341566/1‑246 (MQ=255)                                                                tACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGtt                                                                                                                                                                                    >  2:113968/1‑251 (MQ=255)                                                                    gCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGc                                                                                                                                                                                >  1:490851/1‑251 (MQ=255)                                                                                 cTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGt                                                                                                                                                                   >  2:493576/1‑251 (MQ=255)                                                                                      gCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTg                                                                                                                                                              <  1:528710/251‑1 (MQ=255)                                                                                          cACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGcc                                                                                                                                                          <  1:493576/251‑1 (MQ=255)                                                                                             gTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCggg                                                                                                                                                       >  1:51645/1‑250 (MQ=255)                                                                                                   gATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGc                                                                                                                                                 >  2:323199/1‑251 (MQ=255)                                                                                                          cgtgtcGACCTGATCCAGTCGTTGCAAATCGTCACGAATTCCCAAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATTCGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACt                                                                                                                                            <  2:421884/245‑1 (MQ=255)                                                                                                            gctcGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTg                                                                                                                                           <  1:560312/248‑1 (MQ=255)                                                                                                                         cAGTCTTTGCAAATCGCCGCAAAATCCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGgtg                                                                                                                           <  1:564396/251‑1 (MQ=255)                                                                                                                          aggcGTTGCAAATCGGCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTTCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTTGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGgtgt                                                                                                                          <  1:468543/248‑1 (MQ=255)                                                                                                                             cGTTGCAAATCGACGCGAAATGCCCACAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTg                                                                                                                       >  2:349760/1‑251 (MQ=255)                                                                                                                              gTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGc                                                                                                                      >  1:414714/1‑251 (MQ=255)                                                                                                                                tgaaaaTCGTCGCGAAATGCCAAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCg                                                                                                                     <  1:215762/247‑1 (MQ=255)                                                                                                                                tGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCgg                                                                                                                    >  2:229297/1‑251 (MQ=255)                                                                                                                                    aaTCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGttt                                                                                                                 >  1:229495/1‑250 (MQ=255)                                                                                                                                                    ccAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGggctgg                                                                                                <  1:147959/251‑1 (MQ=255)                                                                                                                                                      aaaaaGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTg                                                                                                                                                                                             <  2:260572/156‑1 (MQ=255)                                                                                                                                                      aaaaaGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTg                                                                                                                                                                                             >  1:260572/1‑156 (MQ=255)                                                                                                                                                      aaaaaGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACGGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGggctggct                                                                                              <  1:632853/251‑1 (MQ=255)                                                                                                                                                          aGACATGCCGTTACTGCCACTCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCACCGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTACTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGACTGGCTGcc                                                                                           >  2:637313/1‑250 (MQ=255)                                                                                                                                                              aTGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACg                                                                                      <  2:490851/251‑1 (MQ=255)                                                                                                                                                                         gCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGaa                                                                            >  2:61586/1‑250 (MQ=255)                                                                                                                                                                          ccAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAAc                                                                          >  2:426119/1‑251 (MQ=255)                                                                                                                                                                                    aGANCCCGCAGAGAATCAAAATTAAAAACAGCGTGGGCGAAATTCGAATACGATTAAACATCAACGTTCCCCAGCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTTGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGGGAGTGGGCTGGCTGCCAGACTGAACGCGTAAAGTGCTTGCGtt                                                                <  2:595602/251‑1 (MQ=255)                                                                                                                                                                                      atcacGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGCATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGGTTGGATCTTGTTCAGCAATTCGCAGACGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTa                                                               >  2:99801/5‑250 (MQ=255)                                                                                                                                                                                           gCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGt                                                                                                                                                                                                                          >  1:485926/1‑90 (MQ=255)                                                                                                                                                                                           gCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGt                                                                                                                                                                                                                          <  2:485926/90‑1 (MQ=255)                                                                                                                                                                                                  aTCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGTAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTg                                                  >  2:393607/1‑251 (MQ=255)                                                                                                                                                                                                    cAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGtt                                                <  1:197483/251‑1 (MQ=255)                                                                                                                                                                                                    cAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACGGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGt                                                 <  1:593047/250‑1 (MQ=255)                                                                                                                                                                                                     aaaaTTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGttc                                               <  1:229297/251‑1 (MQ=255)                                                                                                                                                                                                            aaaaCAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCcagc                                        <  1:135857/251‑1 (MQ=255)                                                                                                                                                                                                               aCAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGTTTGCGTTAAACGACTCGCCGGTTTTTCcagcgc                                      >  1:447389/1‑250 (MQ=255)                                                                                                                                                                                                               aCAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCcagcgc                                      >  2:364447/1‑250 (MQ=255)                                                                                                                                                                                                               aCAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCcagcgc                                      >  1:174174/1‑250 (MQ=255)                                                                                                                                                                                                                cAGCGTGGTCGAAATGCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCcagcgcag                                    <  2:469806/251‑1 (MQ=255)                                                                                                                                                                                                                            aaTTCGAATACGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCCAGCGCAGCggcggcggc                          >  1:223341/1‑249 (MQ=255)                                                                                                                                                                                                                                      cGATTAAACATCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCCAGCGCAGCGGCGGCGGCAGCTGATTCCTg              >  1:143648/1‑251 (MQ=255)                                                                                                                                                                                                                                       gATTAAACATCAACGTTCCCCATCAGGCGGCTATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCTCAGTCGAGGCTTAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGttt                                                                                                                 <  1:90455/151‑1 (MQ=255)                                                                                                                                                                                                                                       gATTAAACATCAAAGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTGGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGACGACGTGGCTGAGCCGGTGGTTGATCACTGGCAGGACGGGATGGTGGTTGCGGttt                                                                                                                 >  2:90455/1‑151 (MQ=255)                                                                                                                                                                                                                                                tCAACGTTTCCCATCAGGCGGCAATCACCGCGTTAGTACCTACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTCGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCTGACGGAACGCGGAAACTGCTTGCCTTAAACGACTCGCCTGTTTTTCCAGCGCAGCGCCGGCGGCAGCTgtttactgtcccctcgat    >  2:621261/1‑234 (MQ=255)                                                                                                                                                                                                                                                tCAACGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCCAGCGCAGCGGCGGCGGCAGCTGATTCCTGCACCAGCGAt    >  1:370867/1‑251 (MQ=255)                                                                                                                                                                                                                                                  aaCGTTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCCAGCGCAGCGGCGGCGGCAGCTGATTCCTGCACCAGCGATGc  >  2:64072/1‑251 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       CGCCGGATAGCTAAGTGCCGTCAGAGTGCCCGCTTTGTTCAGCGCGGTACTGGCCTGTAACATTACCGCCCGAGTTTGCGCTAATGCCGCACGTTGCTGATTGCTCTGCTCGACCTGATTCAGTCGTTGCAAATCGTCGCGAAATGCCCAAAAAGACATGCCGTTACTGCCAATCTGCAAGATCCCGCAGAGAATCAAAATTAAAAACAGCGTGGTCGAAATTCGAATACGATTAAACATCAACGCTCCCCATCAGGCGGCAATGACCGCGTTAGTAAATACTCGTCAAAATGTTTCCCAGTTTGGATCTTGTTCAGCAATTCGCAGTCGTGGCTGAGCCGGTGGTTGCTCACTGGCAGGACGGGATGGTGTTTGCGGTTTATTGGTGAGTGGGCTGGCTGCCAGACGGAACGCGGAAACTGCTTGCGTTAAACGACTCGCCTGTTCTTCCAGCGCAGCGGCGGCGGCAGCTGATTCCTGCACCAGCGATGC  >  NC_000913/1970745‑1971236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑