Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,682,261	Δ34 bp	coding (1154‑1187/1287 nt)	dctA ←	C4 dicarboxylate/orotate:H(+) symporter

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3682261	3682294	34	59 [0]	[0] 57	dctA	C4 dicarboxylate/orotate:H(+) symporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3682260	0 (0.000)	57 (0.900)	55/480	0.2	100%	coding (1188/1287 nt)	dctA	C4 dicarboxylate/orotate:H(+) symporter
	?	NC_000913	3682295 =	0 (0.000)					coding (1153/1287 nt)	dctA	C4 dicarboxylate/orotate:H(+) symporter

CACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAATGGTCGCTACGCCGTTACCGACCAGGTTAGTCAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAA  >  NC_000913/3682013‑3682504                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     cacTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcg                                                                                                                                                                                                                                                   >  2:240964‑M1/1‑248 (MQ=255) cacTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcg                                                                                                                                                                                                                                                   >  1:625660‑M1/1‑248 (MQ=255)     tCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacg                                                                                                                                                                                                                                               >  1:459339‑M1/1‑244 (MQ=255)           tAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttc                                                                                                                                                                                                                                         >  2:135583‑M1/1‑238 (MQ=255)            aGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttct                                                                                                                                                                                                                                        >  1:149882‑M1/1‑237 (MQ=255)                   aaGAACATGAAAATGTAACGGAAGAAGTGAAATAAAACTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGAAATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCAAGTTTTTTGTGGTGCAGTTCTTTCAGCCACTTAGCAACGACAgcgcacgagcttctgacata                                                                                                                                                                                                                                  >  2:653457‑M1/1‑230 (MQ=255)                        cATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcgg                                                                                                                                                                                                                            <  1:596719‑M1/251‑27 (MQ=255)                         aTGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTGCGTTCTCCCTCTTAGCAACGACAgcgcacgagcttctgacataaagcggt                                                                                                                                                                                                                           <  1:628782‑M1/251‑28 (MQ=255)                             aaaTGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgat                                                                                                                                                                                                                       <  1:139542‑M1/251‑32 (MQ=255)                              aaTGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgata                                                                                                                                                                                                                      <  1:175533‑M1/251‑33 (MQ=255)                               aTGTCACGGCAGACGTGAAATAAAACTGAACTCACCCCGGAGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGAGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGACCAGTTTTTTGTGGTCCAGTTATTTCACCCACTTAGCAACGAAAgcgaacgagcttctggcatcaagaggtcgata                                                                                                                                                                                                                      >  2:646145‑M1/1‑218 (MQ=255)                                                    aaaCCTGAGCTCACCCAGGTGGTAAGTTCAGGCACATGGGTCAATTATGCGCAAACACCCGCCCTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCACCGACAgcgcatgagcttctgacataaagcggtcgataccgaggatcagcgccagacccg                                                                                                                                                                                                <  1:63275‑M1/251‑55 (MQ=255)                                                    aaaCCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagaccc                                                                                                                                                                                                 <  2:625660‑M1/250‑54 (MQ=255)                                                      aCCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgct                                                                                                                                                                                              >  2:325189‑M1/1‑195 (MQ=255)                                                           aaCTCACCCAGGTGGTAAGTTCAGGCACAGTGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccgg                                                                                                                                                                                         <  2:16643‑M1/251‑62 (MQ=255)                                                            aCTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcgatcgataccgaggatcagcgccagacccgctaccggc                                                                                                                                                                                        <  2:512797‑M1/251‑63 (MQ=255)                                                              tCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGCTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggca                                                                                                                                                                                       >  1:345036‑M1/1‑187 (MQ=255)                                                                           aaGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgc                                                                                                                                                                          >  1:633130‑M1/1‑174 (MQ=255)                                                                            aGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcag                                                                                                                                                                        <  1:325189‑M1/251‑79 (MQ=255)                                                                             gTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCGGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgcgagcggcaaatggcccaccgcaga                                                                                                                                                                       <  2:135913‑M1/251‑80 (MQ=255)                                                                               tCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcag                                                                                                                                                                        >  2:112018‑M1/1‑170 (MQ=255)                                                                                    cacaGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtc                                                                                                                                                                >  2:109641‑M1/1‑165 (MQ=255)                                                                                     acaGGGGTCAATTATGCGCAAACAACCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaacggcaaatggcccaccgcagagatcgtcg                                                                                                                                                               <  2:123426‑M1/251‑88 (MQ=255)                                                                                           gTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgcc                                                                                                                                                          >  1:52793‑M1/1‑158 (MQ=255)                                                                                             cAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagc                                                                                                                                                       <  1:248719‑M1/251‑96 (MQ=255)                                                                                                ttATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacg                                                                                                                                                    >  1:204728‑M1/1‑153 (MQ=255)                                                                                                  aTGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTCTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgat                                                                                                                                                  <  2:39186‑M1/251‑101 (MQ=255)                                                                                                    gcgcAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataa                                                                                                                                                <  2:204728‑M1/251‑103 (MQ=255)                                                                                                      gccaacacCCGCACTCGGGGCAGGGAGTGCGGGCCTAAGTGATGAGATTCAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggaccagcgccagaaccgctaccggcaaatggcccaccgcagcgagcgtcgccgccagcacgataa                                                                                                                                                >  2:533058‑M1/4‑147 (MQ=255)                                                                                                          acacCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccac                                                                                                                                          >  1:26398‑M1/1‑143 (MQ=255)                                                                                                                gCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACa                                                                                                                                                                                                                                                      <  1:102967/137‑1 (MQ=255)                                                                                                                gCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACa                                                                                                                                                                                                                                                      >  2:102967/1‑137 (MQ=255)                                                                                                                     cGGGGAAGGGAGTGCGGGCATAAGTGAGGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcttcgccgccagcacgataaatccactacccgttacc                                                                                                                               <  2:400550‑M1/251‑120 (MQ=255)                                                                                                                        ggAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccct                                                                                                                            <  1:366137‑M1/251‑123 (MQ=255)                                                                                                                           aGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgcc                                                                                                                         >  2:162002‑M1/1‑126 (MQ=255)                                                                                                                                 tGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttaccactgccgcccct                                                                                                                   >  2:403183‑M1/1‑120 (MQ=255)                                                                                                                                                    aTTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaac                                                                                                 >  1:150370‑M1/1‑101 (MQ=255)                                                                                                                                                         gagGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgatt                                                                                           >  1:344403‑M1/1‑96 (MQ=255)                                                                                                                                                            gATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaac                                                                                        >  1:16365‑M1/1‑93 (MQ=255)                                                                                                                                                             aTAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaaca                                                                                       <  2:10293‑M1/251‑160 (MQ=255)                                                                                                                                                             aTAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaac                                                                                        >  1:377046‑M1/1‑92 (MQ=255)                                                                                                                                                                aTTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaacagcg                                                                                    >  1:178866‑M1/1‑89 (MQ=255)                                                                                                                                                                    gTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagccgcaacacgattaacagcgtgat                                                                                >  2:312467‑M1/1‑85 (MQ=255)                                                                                                                                                                         ttttGACATCCGGCGCACGATTATTCAGCCCATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagaccagctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcacctttagaagaaagcagcaacacgattaacagcgtgatttggt                                                                           >  1:434562‑M1/1‑80 (MQ=255)                                                                                                                                                                                 tCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctacc                                                                                                                                                                                           <  2:94841‑M1/131‑60 (MQ=255)                                                                                                                                                                                 tCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctacc                                                                                                                                                                                           >  1:94841‑M1/1‑72 (MQ=255)                                                                                                                                                                                        cACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaacagcgtgatttggtggacgatatccatct                                                            <  1:479676‑M1/251‑187 (MQ=255)                                                                                                                                                                                            attagtCAGCACATCTGCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAccgcacgagcttctgacataaagcggtcgataccgaggatcagccccagacccgcgaccggcaaatggcccaccgcagagagcggcgccgccagcacgataaagccactacccgttacccctgccgcccctgtagaagaaagcagcaacacgattaacagcgtgatttggtggacgatagccatctgact                                                        <  2:547513‑M1/251‑191 (MQ=255)                                                                                                                                                                                                 tCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaacagcgtgatttggtggacgatatccatctgactgtta                                                    <  1:625938‑M1/250‑195 (MQ=255)                                                                                                                                                                                                             ccAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaacagcgtgatttggtggacgatatccatctgactgttagtggcctgggcga                                       <  2:459339‑M1/251‑208 (MQ=255)                                                                                                                                                                                                                gTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacacctgccgcccctttagaagaaagcagcaacaagattaacagcgtgatttggtggacgatatccatctgactgttagtggcctgggcgata                                     >  1:52278‑M1/1‑41 (MQ=255)                                                                                                                                                                                                                 ttttttGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctactggcaaatggcccaccgaagagagcgtcgccgccagcacgataaagcccctacccgttacccctgccgcccctttagaagacagcagcaacacgattaacagcgggatttggtggaggatatcaatatacctgtaagtggcctgggcgataa                                    >  2:627715‑M1/1‑40 (MQ=255)                                                                                                                                                                                                                    tttGTGGTCCAGTTCTTTCAGCCACTTAGCAACGACAactcacgagcttcgtacataaatcggacgataccgaggatcagcgccagacccgctaccgacaaatggcccaccgcagagagcgtcgccgccagcacgataacgccactacccattacccctgccgcccctttagaagaaagcaccaacacgattaacagcgcgattttgtggacgatatccatctgactgttagtgccctgggcgatagacac                                >  2:256152‑M1/1‑37 (MQ=255)                                                                                                                                                                                                                            ccAGTTCTTTCACCCACTAAGCAACGACAgcgcacgagcgtctgacataaagcggtcgacaccgaggatcagcgccagacccgctaccggcaaatggccccccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaacagcgtgatttggtggacgatatccatctgactgttagtggcctgggggataaacaccgccgcca                        <  2:129397‑M1/251‑223 (MQ=255)                                                                                                                                                                                                                                           aCTTAGCAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagggcgtcgccgccagcactataaagccactacccgttccccctgccgcccctttagaagaaagcatcaacacgattaacagcgtgatttggtggacgatatccatctgactgttagtggcctgggcgataaacaccgccgccattgtcaggtatatcg         <  1:393055‑M1/251‑238 (MQ=255)                                                                                                                                                                                                                                              tAGCAACGACAgcgcacgagcttctgacataaagcggtcgatacagaggatcagcgccagacccgctaccggcaaatggcccaccgcagcgagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacgcgattaacagcgtgatttcgtggacgatatccatctgactgtgagtggcctggtcgataaacaccgccgccattgtcaggaatatcgatg      >  2:472770‑M1/1‑11 (MQ=255)                                                                                                                                                                                                                                                 cAACGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacacgattaacagcgtgatttggtggacgatatccatctgactgttagtggcctgggcgataaacaccgccgccattgtcaggtatatcgatgtgc   >  1:334263‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                                  aaCGACAgcgcacgagcttctgacataaagcggtcgataccgaggatcagcgccagacccgctaccggcaaatggcccaccgcagagagcgtcgccgccagcacgataaagccactacccgttccccctgccgcccctttagaagaaagcagcaacacgattaacagcgtgatttggtggccgatatccatctgactgttagtggcctgggcgataaacaccgccgccattgtccggaatatcgatgtgcc  >  2:135035‑M1/1‑7 (MQ=255)                                                                                                                                                                                                                                                  aaCGACAgcgcacgagcttctgacaaaaagcgttcgctaccgaggatcagccccagacccgctaccggaaaatggcccaccgcagaggggggcgccgccagcacgataaagccactacccgttacccctgccgcccctttagaagaaagcagcaacccgattaacagcgtgatttggtggacgatatccatctgacttttagtggcctgggcgataaacaccgccgccattgtcaggtatatcgatgtgcc  <  2:270473‑M1/251‑245 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     CACTTCGTGTTAGACCGCAAGAACATGAAAATGTCACGGAAGAAGTGAAATAAACCTGAACTCACCCAGGTGGTAAGTTCAGGCACAGGGGTCAATTATGCGCAAACACCCGCACTCGGGGAAGGGAGTGCGGGCATAAGTGATGAGATTAAGAGGATAATTCGTGCGTTTTGCCATCCGGCGCACGATTATTCAGCACATCGTCCAGTTTTTTGTGGTCCAGTTCTTTCACCCACTTAGCAACGACAATGGTCGCTACGCCGTTACCGACCAGGTTAGTCAGCGCACGAGCTTCTGACATAAAGCGGTCGATACCGAGGATCAGCGCCAGACCCGCTACCGGCAAATGGCCCACCGCAGAGAGCGTCGCCGCCAGCACGATAAAGCCACTACCCGTTACCCCTGCCGCCCCTTTAGAAGAAAGCAGCAACACGATTAACAGCGTGATTTGGTGGACGATATCCATCTGACTGTTAGTGGCCTGGGCGATAA  >  NC_000913/3682013‑3682504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑