Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,269,876	IS5 (+) +4 bp	intergenic (+309/‑100)	lpxT → / → mepS	lipid A‑core phosphotransferase/peptidoglycan endopeptidase/peptidoglycan L,D‑carboxypeptidase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2269876 =	0 (0.000)	51 (0.810)	46/482	0.4	100%	intergenic (+309/‑103)	lpxT/mepS	lipid A‑core phosphotransferase/peptidoglycan endopeptidase/peptidoglycan L,D‑carboxypeptidase
	?	NC_000913	2288919 =	NA (NA)					noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	= 2269879	0 (0.000)	35 (0.550)	31/484	1.0	100%	intergenic (+312/‑100)	lpxT/mepS	lipid A‑core phosphotransferase/peptidoglycan endopeptidase/peptidoglycan L,D‑carboxypeptidase
	?	NC_000913	= 2290113	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region

TGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTC  >  NC_000913/2288671‑2289155                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                              tGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGGGAATATaagg                                                                                                                                                                                                                                              >  1:624436/1‑250 (MQ=255)    aCAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCCACTGTCTCACCACACTCA‑ACAGTTGTTGCCAATGCTCTGGGGGAATATaaggca                                                                                                                                                                                                                                            >  2:450994/1‑247 (MQ=255)           gATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAAt                                                                                                                                                                                                                                   <  2:555527/251‑1 (MQ=255)                         aaTACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttc                                                                                                                                                                                                                     <  2:471579/251‑1 (MQ=255)                            aCTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAttctt                                                                                                                                                                                                                   <  2:512506/250‑1 (MQ=255)                                      cTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCCCCATACTCA‑ACAGTTGATGCCAATGCTATGGGGGAATATAAGGAAGGTGCGAATAAGAGGGGAAATTCTTTTCGGCTGAC‑t                                                                                                                                                                                                       >  1:238587/1‑251 (MQ=255)                                                attcattTAAATGTACTAATACCCTCCGTTAATTTCAGCATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGCTCTCTTTTTTCAGGGCAAAACCAACAACTGTTTCACCCTTCTTA‑ACCATTGATGCCAATGCTATGGGGGTATATATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCC‑TCAGtcatttt                                                                                                                                                                                             >  2:629941/1‑250 (MQ=255)                                                      ttCAATGTACTGATACCCTCCGTTACTTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCCTCAACTATCTCACCCTACTCA‑ACAGTTGATGCCAAAGCCATGGGTGAATATAAAGAAGGTGCGAATAAGCGGGGAAATTTTTCTCGGCTGAC‑TCAGTCATTTCATttct                                                                                                                                                                                       >  2:125985/1‑251 (MQ=255)                                                         aaTGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATTAACCAGCTGGATATCTTTTTCCACGAAAACACCCTCCACTGTCTCACCCCA‑TCACACAGTTGATGCCCCAGCTATGGGTGAATATAAGAGAGGCGCGAAAAAACGGGGAAATTTTTCTCTGCTGAC‑TCAATCATTTCATttctttt                                                                                                                                                                                    >  2:560328/1‑249 (MQ=255)                                                                  atccccTCCGTTAATTTCAGTATTATTACTTACTCCAACTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTCCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCTCCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGCAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGc                                                                                                                                                                           <  1:281046/248‑1 (MQ=255)                                                                  aTACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTACCATAAACCAGCTGGGTATCTTTTTCCAGGACAACACCATCAACTGTCTCTCCATACTCA‑ACAGTTTATGCCAAAGCTTTGGGCGGAAATAAGTAAAGGGCGAATAAGCGGGGAAATTCTTCTCCGCTGAC‑TCAGAcatttaatttttttgtatttttgg                                                                                                                                                                           >  1:446092/1‑237 (MQ=255)                                                                       cTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACCGTTGAGGCCAATGCTATGGGTGAATATAAGGAAGGGGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTTATTTCATTTCTTCTTGTTTGAGCCGAtt                                                                                                                                                                      >  1:100968/1‑251 (MQ=255)                                                                         ccGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTTATGCCAATGCTATGGGGGAATATAAGGAAGGTGCGAATAAACGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttt                                                                                                                                                                    >  2:462633/1‑251 (MQ=255)                                                                                 ttCAGTATTATTACTTACACCAAATTCTTTTATATGATGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATTTCTTTTTCCCGGACAACAACATCAACTGTCTCACCATCCTCC‑ACCGTTGATGCCAATGCTATTGGTGAATATTAGGAAGGCGAGAATAAGCGGGGACATTCTTCTTGGCTGAC‑TCAGGCATTTCATTTCTTCCTGTTTTAGCCGATTTTTTTTcccc                                                                                                                                                            >  2:69450/1‑250 (MQ=255)                                                                                     gTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa                                                                                                                                                         >  1:248435/1‑250 (MQ=255)                                                                                          attaCTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGTTTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGGTATCTTTTTCCCGGACAAAACCATCAAATGTCTCACCCTACTCC‑ACAGTTGATGCCCATGCTATAGGGGGATTTAAGGGAGGGGCGAAGAAGCGGGGGAATTTTTCTCGGCTGTC‑TCAGTTATTTCATTTCTTTATTTTTGAGCCGGTTTTTTCTCTCCTAAATGCCt                                                                                                                                                   >  1:3849/1‑251 (MQ=255)                                                                                            tacttacACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGAGGTCCCATAAACCATTTGGATATCTTTTTCCAGGACAACACCATCTAATGTCTCACCATACCCA‑ACAGTTTATGCCAATGCTTTGGGTGGATATAAAGAAGGGGCGAATAAGCGGGGAAATTCTTTTCGGCCGACCTC‑GTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCttt                                                                                                                                                 >  1:645289/1‑250 (MQ=37)                                                                                              cttacACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGAC‑TCAGTCATTTTATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa                                                                                                                                                >  1:97261/1‑250 (MQ=255)                                                                                                       aaTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAt                                                                                                                                      <  2:624436/251‑1 (MQ=255)                                                                                                        aTTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTTCCATAAACCAGCTGGATATTTTTTTCCAGGACAAAACCATCAACTTTCTCACCATACTCC‑ACAGTTGATGCCAATGCCATGGGGGAATATAAGGAAGGTGCGAAAAAGCGGGGAAACTCTTCTCGGCTGGC‑TCAGGCATTTCAATTTTTCATGTTTTAGCCGCGTTTTTTTCCCCTAAATGCCTTTAATCAGCCTAtt                                                                                                                                     >  2:493687/1‑251 (MQ=255)                                                                                                              ttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGATATCTTTTTTCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAACGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTTTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGAcc                                                                                                                               >  1:443230/1‑251 (MQ=255)                                                                                                                  atGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                                                                                                                           <  1:462633/251‑1 (MQ=255)                                                                                                                  atGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt                                                                                                                           <  1:570639/251‑1 (MQ=255)                                                                                                                                                       gCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGACTAACCCTACTCA‑ACAGTTGATGCCAATGCTATGGGGGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TAAGTCGTTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCACGTAAATGCCTTGAATCAGCCTATTTAGACCGTATCTTCGCAATTTAAGGCGTTATCCCCAGTTTTTAGTg                                                                                       >  1:606392/1‑250 (MQ=21)                                                                                                                                                       gCGGTCACATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTg                                                                                       >  2:417254/1‑250 (MQ=255)                                                                                                                                                                   aCCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCAc                                                                          >  1:361776/1‑251 (MQ=255)                                                                                                                                                                      aGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGa                                                                       <  1:448959/251‑1 (MQ=255)                                                                                                                                                                                     tCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTcc                                                        >  1:154016/1‑251 (MQ=255)                                                                                                                                                                                       cAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGc                                                      >  1:545579/1‑251 (MQ=255)                                                                                                                                                                                                     cAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTg                                         <  1:450994/250‑1 (MQ=255)                                                                                                                                                                                                        cTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGcc                                      >  1:611105/1‑250 (MQ=255)                                                                                                                                                                                                          gTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAg                                    <  2:248435/250‑1 (MQ=255)                                                                                                                                                                                                                 cATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATa                            <  2:489018/251‑1 (MQ=255)                                                                                                                                                                                                                  aTACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTGCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATaa                           <  2:645289/251‑1 (MQ=255)                                                                                                                                                                                                                       cA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATc                       <  1:493687/250‑1 (MQ=255)                                                                                                                                                                                                                          aCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTACATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGcc                    >  1:83780/1‑251 (MQ=255)                                                                                                                                                                                                                                    ccAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTAt          >  2:73072/1‑251 (MQ=38)                                                                                                                                                                                                                                            aTGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTc  >  1:570910/1‑251 (MQ=34)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                              TGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCA‑ACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAC‑TCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTC  >  NC_000913/2288671‑2289155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.