Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 568,449 IS2 (–) +5 bp coding (135‑139/333 nt) emrE → multidrug/betaine/choline efflux transporter EmrE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 568449 =0 (0.000)30 (0.770) 28/490 0.4 100% coding (135/333 nt) emrE multidrug/betaine/choline efflux transporter EmrE
?NC_000913 = 1469240 NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 5684530 (0.000)38 (0.990) 35/488 0.2 100% coding (139/333 nt) emrE multidrug/betaine/choline efflux transporter EmrE
?NC_000913 1467910 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region

GGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTAAACGACTAAAATATGGAGGCTCTTATATTTATATGAGC  >  NC_000913/568204‑568700
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                       
gcttacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGttatt                                                                                                                                                                                                                                                        <  2:102493‑M1/6‑1 (MQ=255)
 ggTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTACAAACTGTAGTTCAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTCCAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtg                                                                                                                                                                                                                                                       <  2:130534‑M1/251‑3 (MQ=255)
       ccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatctgttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAg                                                                                                                                                                                                                                                 >  2:267147‑M1/239‑251 (MQ=255)
          gagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGGTATTAGCTCAGACg                                                                                                                                                                                                                                              >  1:117295‑M1/236‑251 (MQ=255)
                 aaaaGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatt                                                                                                                                                                                                                                       <  1:182430‑M1/251‑19 (MQ=255)
                  actggcaggctgctccaccatgctgccgggcaacgagggagaccgtcatcaccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCtt                                                                                                                                                                                                                                       <  2:159785‑M1/23‑1 (MQ=255)
                   aaGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACACTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttc                                                                                                                                                                                                                                     >  1:337375‑M1/1‑231 (MQ=255)
                       aCANCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccaga                                                                                                                                                                                                                                 <  2:363301‑M1/251‑25 (MQ=255)
                         ggctgctacaccatgttgccgggcaacgagggagaccgtcacccccggttcaaagctctgctgaacaattgcgatctttgcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTCTTAGCTCAGACGCTGGCTTATATTcc                                                                                                                                                                                                                                >  2:286518‑M1/221‑250 (MQ=255)
                                  aaCACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatc                                                                                                                                                                                                                      <  1:259475‑M1/251‑36 (MQ=255)
                                   ccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTg                                                                                                                                                                                                                     <  1:92668‑M1/41‑1 (MQ=255)
                                   acacAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatc                                                                                                                                                                                                                      >  2:39721‑M1/1‑215 (MQ=255)
                                    cacaATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcac                                                                                                                                                                                                                    <  1:86251‑M1/251‑38 (MQ=255)
                                          gatgaAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTAGCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaac                                                                                                                                                                                                               <  1:166543‑M1/250‑43 (MQ=255)
                                             gaAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccat                                                                                                                                                                                                           <  2:104129‑M1/251‑47 (MQ=255)
                                                     agggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAg                                                                                                                                                                                                   >  2:18445‑M1/193‑251 (MQ=255)
                                                            agttCAAACTGTAGTACAATTCTCTCCAGGTTGAACAGGAAAGAATATGCTATGAAACCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc                                                                                                                                                                                            <  2:202390‑M1/251‑62 (MQ=255)
                                                                     ccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCt                                                                                                                                                                                   <  2:5488‑M1/75‑1 (MQ=255)
                                                                       ggttcacagttctgatgtacaattgcgagcttttcttgtgtggtacgccgtcggcgttcctccggccctaagacatctatcatctgtgctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggtgattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATCCACACAGGGATTGCTTATGCTATCTGGTCATGAGTCGGAGTTGTCCtgc                                                                                                                                                                                 <  2:315496‑M1/77‑2 (MQ=255)
                                                                              agctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctcctgccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACATGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCtt                                                                                                                                                                          >  1:384522‑M1/168‑251 (MQ=255)
                                                                                                aGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccaagcgcac                                                                                                                                                        >  1:353090‑M1/1‑154 (MQ=255)
                                                                                                 ggAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccagtacaagcccgctgccgcagatagtcccgtggcgagcgataacccagcgcact                                                                                                                                                       <  1:281848‑M1/251‑99 (MQ=255)
                                                                                                  gAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcact                                                                                                                                                       >  1:48105‑M1/1‑152 (MQ=255)
                                                                                                    aaGAATATGCTATGAACCCTTCTATTTCTCTTGGTGGTGCAATACTTGCAGAGGTCATTGTTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatc                                                                                                                                                    >  2:58027‑M1/1‑150 (MQ=255)
                                                                                                       ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTAtt                                                                                                                                                                                        >  1:152054‑M1/143‑212 (MQ=255)
                                                                                                       ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTAtt                                                                                                                                                                                        <  2:152054‑M1/70‑1 (MQ=255)
                                                                                                         cctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAAc                                                                                                                                                >  2:338479‑M1/141‑250 (MQ=255)
                                                                                                              tATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccat                                                                                                                                          >  1:96224‑M1/1‑140 (MQ=255)
                                                                                                                     gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTgcc                                                                                                                                   <  1:39847‑M1/123‑1 (MQ=255)
                                                                                                                          tatTTATCTTGGTGGTGAAATAATTGCCGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGCTATGGCCTTCTGTTGGTACTATTATTAGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttttcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcccactatgcgtacgccactcgtgataatgg                                                                                                                              >  2:339191‑M1/1‑128 (MQ=255)
                                                                                                                             cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATta                                                                                                                           >  1:117576‑M1/121‑251 (MQ=255)
                                                                                                                                 cTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacg                                                                                                                       >  1:97476‑M1/1‑121 (MQ=255)
                                                                                                                                           aaagacatcaatcatctgttttccaatgactagtctaaaaaatagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagactaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTCTGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCCGGACCTGCCCGCCATTATAGGCATGATGTTg                                                                                                             <  2:268493‑M1/145‑1 (MQ=255)
                                                                                                                                            aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTg                                                                                                             <  1:129548‑M1/145‑1 (MQ=255)
                                                                                                                                                   gCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttg                                                                                                     >  2:53078‑M1/1‑103 (MQ=255)
                                                                                                                                                      gagGTCATTGGTACAACCTTAATGAAGTTTGCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccatgacgagcccgctgccgcagagattcccggggcgagcgataacccagcgcactatgcgggtgccattcgttataatgctcgaacgcctctgcaaggttctttgctg                                                                                                  <  1:194523‑M1/251‑152 (MQ=255)
                                                                                                                                                            aTTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgtt                                                                                             >  1:151982‑M1/1‑94 (MQ=255)
                                                                                                                                                                gTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaaccc                                                                                        >  1:313365‑M1/1‑90 (MQ=255)
                                                                                                                                                                           aTGNAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctctaacgcctctgcaaggttctttgctgccgttaacccggctggtttgg                                                                             <  2:359735‑M1/251‑173 (MQ=255)
                                                                                                                                                                             gAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggc                                                                           <  2:143134‑M1/251‑175 (MQ=255)
                                                                                                                                                                                 aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGCGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACg                                                                       <  2:200902‑M1/183‑1 (MQ=255)
                                                                                                                                                                                   ttCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgat                                                                      >  1:24099‑M1/1‑71 (MQ=255)
                                                                                                                                                                                      aGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactg                                                                  <  2:48105‑M1/251‑184 (MQ=255)
                                                                                                                                                                                           gTTTTAAACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGGTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgaggatgcctttcgttataatgctccaacgcctctgcaaggttctttgctgccgttaacccgtctggcttgggcatgatactgatgt                                                              >  2:275573‑M1/1‑63 (MQ=255)
                                                                                                                                                                                                ctatcacttatttaagagatataggttgtctggagattaagggggcaagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGCTTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTAACGAagaacaccatctt                                                         <  2:229850‑M1/197‑5 (MQ=255)
                                                                                                                                                                                                acacGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcac                                                        >  2:264128‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                        tatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAaata                                                   >  2:90058‑M1/46‑248 (MQ=255)
                                                                                                                                                                                                        tatttaagtgatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAAtt                                                <  1:389389‑M1/206‑1 (MQ=255)
                                                                                                                                                                                                            ccATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttt                                            <  2:328036‑M1/251‑206 (MQ=255)
                                                                                                                                                                                                                 gatattggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATTCTATCTGGGCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCCCATTAAAATAATTTGTTTCTa                                        >  1:19944‑M1/37‑250 (MQ=255)
                                                                                                                                                                                                                 gatattggttgtctggagattcagggggccagtctaGTTATGAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTa                                        >  1:344368‑M1/37‑250 (MQ=255)
                                                                                                                                                                                                                  gTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacg                                       >  1:135853‑M1/1‑40 (MQ=255)
                                                                                                                                                                                                                  gTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacg                                       >  1:160068‑M1/1‑40 (MQ=255)
                                                                                                                                                                                                                  atattggttgtctggcgattcagggggccagtctaGTTCTTAGCTCAGCCGCTGGCTTATATTCCTATAGGGATTGCTTATGCTCTCTGGTCAGGAGTCGGTATTCTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTaa                                       <  1:379844‑M1/215‑1 (MQ=255)
                                                                                                                                                                                                                    attggttgtctggagattcagggggccattctaGTTATTAGGTCAGGCTCTGGCTTATATTCCTATAGGGATTGCTTATGCTATCTTGTCAGTAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGTATTTTTCGGCCAAAGGCTGGACCTTCCAGCCATTATAGGCATGATGTTGATTTGCGCCGTTGTGTTGATTATTAATTTATTGTCTCGAAGCACCCCACATTAAAATAATTTGTTACTAAAc                                     >  2:241419‑M1/34‑250 (MQ=255)
                                                                                                                                                                                                                     ggTACAATTATTTGTTATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaag                                    <  1:39721‑M1/250‑214 (MQ=255)
                                                                                                                                                                                                                       ggttgtctggagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTAAACGAc                                  >  2:8637‑M1/31‑250 (MQ=255)
                                                                                                                                                                                                                               tttGTTGTTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccatttcaagcccgctgccgcagatattcccgtggcgagccatagcccaacgcactatgcggatgccactcgttataattctcgaacgcctcagcaaggttctttgctgccattaacccgtcttgtttaggcatgatactgatgtagccgcgctttatccttctctcgaagctctctgcta                          <  2:337375‑M1/250‑224 (MQ=255)
                                                                                                                                                                                                                               ggagagtcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTAAACGACTAAAat                            >  1:169090‑M1/23‑248 (MQ=255)
                                                                                                                                                                                                                                gagattcagggggccagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTAAACGACTAAAATATgg                        <  2:4301‑M1/230‑1 (MQ=255)
                                                                                                                                                                                                                                  gTTATTGTTCATCATGCTTGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgtagatattcccgtggcgagcgataacccatcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtctgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattcc                      <  1:240587‑M1/251‑228 (MQ=255)
                                                                                                                                                                                                                                   ttATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattcc                      <  2:151982‑M1/250‑228 (MQ=255)
                                                                                                                                                                                                                                    tATTGTGCATCATTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagagataacccagcgcactatgcggctgcaattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgt                    >  2:256180‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                           aatcattATGGTTATtggctttgcccctatatttccagacatatgttatcacttaacccattacacgcccgctgccgcagatcttcccgtggcgagcgatacccaagcgcactaagcggatgcaattcgttataatgctcgaacgcctctgcaaggttctttgatgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctc             >  2:270896‑M1/2‑15 (MQ=255)
                                                                                                                                                                                                                                            atcatTCTGGTTATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtctcgctttatcgttttcacgcagctctctgctattccgttactctcc            <  1:138398‑M1/251‑238 (MQ=255)
                                                                                                                                                                                                                                              cagtctaGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTTTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTAAACGACTAAAATATGGAGGCTCttatattt          >  2:43582‑M1/8‑251 (MQ=255)
                                                                                                                                                                                                                                                    ggTTATtggattttcccctatatgtccagacatctgttatcccttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccggactccg    <  2:273710‑M1/251‑246 (MQ=255)
                                                                                                                                                                                                                                                       tattaGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTAAACGACTAAAATATGGAGGCTCTTATATTTATATGAGc  <  1:102493/250‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                       
GGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGATGAAACAGGTGAGTTGAGTTCAAACTGTAGTACAATTCTCTCCAGTTTGAACAGGAAAGAATATGCTATGAACCCTTATATTTATCTTGGTGGTGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAAGGTTTTACACGGTTATGGCCATCTGTTGGTACAATTATTTGTTATTGTGCATCATTCTGGTTATTAGCTCAGACGCTGGCTTATATTCCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATTGTCCTGATTAGCTTACTGTCATGGGGATTTTTCGGCCAACGGCTGGACCTGCCAGCCATTATAGGCATGATGTTGATTTGTGCCGGTGTGTTGATTATTAATTTATTGTCACGAAGCACACCACATTAAAATAATTTGTTTCTAAACGACTAAAATATGGAGGCTCTTATATTTATATGAGC  >  NC_000913/568204‑568700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.