Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 434,848 G→A A68T (GCT→ACT)  ribE → 6,7‑dimethyl‑8‑ribityllumazine synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913434,8480GA95.5% 117.9 / ‑5.1 44A68T (GCT→ACT) ribE6,7‑dimethyl‑8‑ribityllumazine synthase
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base A (22/20);  total (24/20)
Fisher's exact test for biased strand distribution p-value = 4.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGGCTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTA  >  NC_000913/434614‑435091
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    
cTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGGGCACTGACTAAAACCGGTAAAt                                                                                                                                                                                                                                       >  1:101166/1‑250 (MQ=255)
    gaggccattccctgaCCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCGCGGACGCGCGCGTCTCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGGGCACTGACTAAATCCGGTAAATacgac                                                                                                                                                                                                                                  <  2:190173/237‑1 (MQ=255)
            aCTCGAAACCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGAt                                                                                                                                                                                                                          <  2:288856/251‑1 (MQ=255)
               cGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGGGATTgg                                                                                                                                                                                                                       >  1:143303/1‑250 (MQ=255)
                            agaaAATGATCATTAGTGAAGCTAACGTTGCTAACCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTAGCAATGACAGCCTGCTGGAAGGTGTAATGGACGCACTGAAACGTGTCGGTCAGGTAAAAGATGAAAACATTACCGTGGTTTGGGTGCGTGTTGCCTATGAGCTGCCGCTTGCGTCCGGTGCACTGACGAAAACCGGTAAATTCGGCGTTGTGATTGCGCTGGGTACGGtt                                                                                                                                                                                                          <  2:204269/251‑1 (MQ=255)
                             gaaAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGttt                                                                                                                                                                                                         >  2:387162/1‑250 (MQ=255)
                                aaTGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCAATGACTAAAACCGGTAAATACGACGCGGGGAGTGCGCTGGGATCGGTTAttt                                                                                                                                                                                                      >  2:179413/1‑250 (MQ=255)
                                  tGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGGGCAATGGCTAAAACCGGTAAATACGACGCGGTGGTTGAGCTGGGGACCGTTATTCgg                                                                                                                                                                                                    >  2:37476/1‑250 (MQ=255)
                                   gAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCgtg                                                                                                                                                                                                   <  1:156441/251‑1 (MQ=255)
                                   gAACAGTAGTGAAGCTAACGGTGCTACCCCGGACGCTCGCGTCGCCATCACCATCTCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCATGTAAAAGATGAAAGCATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGGTATTCgtg                                                                                                                                                                                                   <  2:234741/251‑1 (MQ=255)
                                          attGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCa                                                                                                                                                                                             <  2:302485/250‑1 (MQ=255)
                                                     cGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGGGCACTGACTAAAACCGGGAAATACGACGCGGTGATTGCGCTGGGCACGGTTAATCGTGGTGGCACTGACCACTTTg                                                                                                                                                                                 >  2:316741/1‑251 (MQ=255)
                                                      gTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTg                                                                                                                                                                                 >  1:129735/1‑250 (MQ=255)
                                                             ccccGGAAGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGGGCAATGACTAAAACCGGTAAATACGACGAGGTGATTGCGCTGGGTACGGGTATTCGTGGTGGCACGGCCCACTTTGAATATggc                                                                                                                                                                         >  2:388515/1‑249 (MQ=255)
                                                                  gACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTc                                                                                                                                                                                                      <  1:315692/217‑1 (MQ=255)
                                                                         gcggcgccagcgccATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTgca                                                                                                                                                             <  2:387450/239‑1 (MQ=255)
                                                                                 aTCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTATAAACGGTAAATAAGACGCGGTGGTTGCGCTGGGTACGGTTATTCGTGGAGGCACTCCCCACTTTGAATCTGTCGCTGGGGGTGCAAGCAACgg                                                                                                                                                     >  2:340263/1‑251 (MQ=255)
                                                                                                                 tGACAGCCTGATGGAAGGTGCAATTAACGCACTGAAACGTATGGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGATACCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTTACTAAAACCGCGAAATACGCCGCGGGGATTGCGCCAGGTGCGGATATTGCAGGTGGCACTTCGCACTTTGACTATGGAGCTGGCGATGCAACGAACGACCTGGCGCATGCTGCCCAGGTCCGTGAAATTc                                                                                                                     >  1:375328/1‑251 (MQ=255)
                                                                                                                                 ggggCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGGGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGGTGCTTTTGGGGt                                                                                                     >  1:96019/4‑251 (MQ=255)
                                                                                                                                    gCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCt                                                                                                  <  2:216081/251‑1 (MQ=255)
                                                                                                                                     cAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATCCCGGTTGCTTTTGGGGTTCTg                                                                                                 >  1:74569/1‑251 (MQ=255)
                                                                                                                                            cGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGGAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATTGCGCTGGTGGTGCAAGCCACGGCCTGGCCCAAGTTGCCCCGGACAGCGAAATTCCCGTTGCTTTTGGGGTTCTGAACACTg                                                                                          >  2:285356/1‑251 (MQ=255)
                                                                                                                                                    aacgtcgcGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGCAAATAAGACGCGGTAATTGCGCCGGGTACGGGTATTCGCGGTGGCACTGCCCACTTTGAATATGTTGATGGTGGTGCAAGCAACGGCTTGGCGCATGTTGTCCAGGGCAGAGAAATTCCGGTTGCTTTTGGGGTTCTGATCAATGAAAGcctt                                                                                  >  2:204549/8‑248 (MQ=255)
                                                                                                                                                           cGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGGGCACAGACTAAAACCGGTAAATACGCCGCGGTGATTGGGCTGGGTACGGTTATTCGTGGGGGGACTGCCCACTTTTAATAAGGCGCTGGGGGTGCAAGCAACGGCCGGGCGCATGTTTCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACa                                                                             >  2:116024/1‑249 (MQ=255)
                                                                                                                                                               cAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGAt                                                                       <  1:152312/251‑1 (MQ=255)
                                                                                                                                                               cAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGAt                                                                       <  1:207391/251‑1 (MQ=255)
                                                                                                                                                                  ggaaaaGATGAGAACATTTCGGTTGCTTGGGTGCCTGGGTACTATGAGCTGCCTCTGGGGGCGGGTGCACTGACTAAAGCCGGTAAATACGACGCGGTGATTGCGCTGGGTACGATTAGGCGTGGTGGCACTGCCCACTGTGAATATGTCGCTGGTGGTGTAAGCAACGGCTTGGCGCATGTGTCCCAGTGCAGCGAAATTCCGGTGGCGTTTGTTGTTCTGACCACTGAAATCACTGAACAAGCGACCGa                                                                    <  2:31068/249‑1 (MQ=255)
                                                                                                                                                                                 aTTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGGCTAAAACCCGTAAATACGGCGCGGTGATTGCGCTGGGTACGGTTATTTGGGGTGGCACTGCCCACTTTGAATATGTCGCTGGCGGGGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTATGACCACTGAAAGCATTGAACAAGCGATCGAAAGTGCTGGTACCa                                                      >  1:213649/1‑250 (MQ=255)
                                                                                                                                                                                    gccGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCCCCAAAGc                                                  <  2:291995/250‑1 (MQ=255)
                                                                                                                                                                                     ccGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCt                                                 <  1:176880/251‑1 (MQ=255)
                                                                                                                                                                                          gttTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGca                                             <  1:340263/250‑1 (MQ=255)
                                                                                                                                                                                          gttTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATCCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGcaa                                            <  2:74569/251‑1 (MQ=255)
                                                                                                                                                                                             tGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGGGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGcaaca                                          >  2:340066/1‑250 (MQ=255)
                                                                                                                                                                                                  gcctggtgcctATGAACTGCCGATGGCGGCGGGGGCACTGACCAAAACCGGGAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGATTTTGGGGTTCTGACCACTGAAAGCATTGCACACACGATAGAACGTGGTGGCCCCAAAACTGGCAACAAAgg                                      >  2:50147/1‑249 (MQ=255)
                                                                                                                                                                                                        tgcctATGAGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGa                                >  2:333649/1‑249 (MQ=255)
                                                                                                                                                                                                                aGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAATGTGCAGAAGCTGCACTg                     <  2:206477/251‑1 (MQ=255)
                                                                                                                                                                                                                aGCTGCCGCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTg                     <  1:388515/251‑1 (MQ=255)
                                                                                                                                                                                                                       gCTGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTTCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATTTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTTAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTGACCgcgc              >  1:152787/1‑251 (MQ=255)
                                                                                                                                                                                                                         tGGCGGCGGGTGCACTGACTAAAACCGGTAAATACGACGCGGGGATTGCGCTGGGTACGGTTATTCGGGGGGGCCATGCCCACTTTGAATATGTCGCTGGTGGGGCAAGCAACGGCCTGGCGCATGTTGCCCAGGAAAGCGAAAATCCGGGTGCTTTTGGGGGTCTGACCACTGAAAGCATTGAACAAGCGATCGAAAGGGCTTGCACCCAAGCTGGCAACAAAGGTGCAGAAAGCGCACTGACCGCGCtt            >  2:103166/1‑251 (MQ=255)
                                                                                                                                                                                                                          ggcggcGGGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTGACCGCGCtt            <  2:129735/250‑1 (MQ=255)
                                                                                                                                                                                                                            cggcggGTGCACTGACTAAAAACGGGAAATACGACGCGGGGATTGCGCCGGGGACGGGTATTCGTGGGGGCACTGCCCACTTTGCATATGTCGCTGGGGGTGCAAACAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAAATCCGGGTGCTTTTTGGGGTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAACTGGCAAAAAAAGGGCAGAAGCTGCACTGACCGCGCTTGa          >  1:160255/1‑250 (MQ=255)
                                                                                                                                                                                                                             ggcggGTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAAAAAAGGTGCAGAAGCTGCACTGACCGCGCTTGaa         >  1:449143/1‑250 (MQ=255)
                                                                                                                                                                                                                                gggTGCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCATAAGCTGCACTGACCGCTCTTGAAATGa     <  2:423396/251‑1 (MQ=255)
                                                                                                                                                                                                                                    gCACTGACTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTa  >  1:78588/1‑250 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                    
CTGCGGGGCCATACTCGAACCCGAAGGAAGAAAATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGGCTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTA  >  NC_000913/434614‑435091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: