| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 663,759 | G→A | R69C (CGC→TGC) | dacA ← | D‑alanyl‑D‑alanine carboxypeptidase DacA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 663,759 | 0 | G | A | 97.4% | 122.7 / NA | 39 | R69C (CGC→TGC) | dacA | D‑alanyl‑D‑alanine carboxypeptidase DacA |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (24/14); total (24/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
AAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCGGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATACGAGCGGAAAAAATGGTATTCATGGTCTGAACTACGACATCCGTGATGGAATT > NC_000913/663515‑663993 | aaaTCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGAc > 1:88951/1‑251 (MQ=255) ggCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCATTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTg > 1:134251/1‑251 (MQ=255) ccATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCg < 2:360379/251‑1 (MQ=255) acacAAGCAGCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATGTTCCTGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTc < 2:367582/251‑1 (MQ=255) aTACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAAt > 1:330370/1‑251 (MQ=255) gcgGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTAACGGTGGCCCATGTGTCGTTGCCGATAGTGACTAAATCAGGTTCTTTAAAGTTACCGGCTTTCATTGCGTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGGTCGCGGCGGAAAGCTGCGTTCTGGTCGGCGAGCACTGTGCCGGAGTTATAgcgaatcaaga < 2:200086/251‑11 (MQ=255) ggATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATg > 1:112928/1‑251 (MQ=255) cAGCTGAGAAACCGGAACCTGCATGCACGGTTCGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCCTGCGTCGTCGCCGATAGTGACTAAATCAGTTTCTTTAAATTAACCTGCTTTCATTGCCTGGCCGATAACGTAACTGTCCATTATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCTGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAg < 1:143929/250‑1 (MQ=255) cTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACt > 1:90544/1‑251 (MQ=255) ccGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACAccc < 1:359476/251‑1 (MQ=255) tGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATc > 1:317408/1‑251 (MQ=255) aaCATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCATCGTTCCCCATAGTGACTAAATCAGTTTCTTTAAATTTACCGGATTTCATTCCCTGCACGATAACGTAACTGGTCATCATTATAGTCAGGCTGGCAGGATCGCAGCGGACACACGCGTTTTGTTCGGCGAGCACTTTGCCAGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCAGGGATCATAGt > 1:258105/1‑251 (MQ=255) aagaaCCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATGGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTc < 2:272887/251‑1 (MQ=255) agaaCGTTTAACCCCCGGGTTCCTGGTCGCCCATGCCTCGACGCCGATCATGACTACATCAGTTTCTTTAAATTTCCCGGATTTCATTGCCTGGCCCATAACGTAACTGCTCATCATTTTGGTCAGGCTGGCAGGATCGAAGCGCACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGGGCTATAGTCAATCAGGTTGTAGGACTCCGCATCGATCTGCGGTACCCCCGGGATCATAGTTTTGctatcc > 2:449483/1‑248 (MQ=255) tAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGAc < 2:364970/139‑1 (MQ=255) tAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGAc > 1:364970/1‑139 (MQ=255) tAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCg > 1:306529/1‑251 (MQ=255) cGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCAtgtg > 1:324216/1‑251 (MQ=255) tACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCa > 2:395279/1‑242 (MQ=255) tACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCa < 1:395279/242‑1 (MQ=255) ggTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCCTAGTTTTGATATTCAGGTCATCGGCATGTgcaggcg > 2:342256/1‑245 (MQ=255) ggCCCACGCGTCATTGCCGAAAGCGACTAAATAAGATTCTTTAAATTTACCGGCGTGCATTACCTGGCCGATAACGTCACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTGCTGTTCGGCGAGCACTTTGCCGGAGTTATAGGCAAGCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATTATAGTTGTGATATTCCGGACATCGTCATGTGCAGCAGAGATa < 2:282275/250‑1 (MQ=255) aTGCGTCGTTGCCGATAGTGACTAAATAAGTTTCTTTAAATTTACGGGCTGTCATTGCCTGGCAGATAAGGTAACTGATCATAATTTTGGTCAGGCTGGCAGGATAGCAGCGGATATCTTCGTTCTGTTCGGCGAGCAATATGCCGGAGATATAGTCAATAAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATCGTTTTGATCTTCAGGGCATTGGCATGTGCAGTAGGGATaacagct > 2:139892/1‑246 (MQ=255) gATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCg > 1:375873/1‑251 (MQ=255) aGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCgtg < 1:357305/250‑1 (MQ=255) aaaTCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCCTCATTTTGGTCAGGCTGGCAGGAGCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTGATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCTGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAgc < 1:283947/249‑1 (MQ=255) cAGTTTCTTTAAATTTACCGGCTTTCATGGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAgg < 2:360465/251‑1 (MQ=255) atttAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTATGTTCGGCGAGCACTTTGCCGGAGTTATAGGCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACAACCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGGAAAAGGACGTGGAAAGAGACGGGGTGAGCGGCAGGCGCTTc > 1:265065/2‑251 (MQ=255) aaaTTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGGGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGGGAGCGCCAGGCGCTTCATgt > 1:343657/1‑250 (MQ=255) aaTTTACCGGCTTTCATTGCCTGGCCGATCACGTAACTGGTCATCATTTTGGTCAGGCTTGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGCCTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAAGATGTGCAAAGAGCCGGTGAGAGCGTCAGGCGCTCCAtta > 2:76775/1‑248 (MQ=255) ttACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATAc < 2:274579/250‑1 (MQ=255) tAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATACGAGCGGAAAAAATGGGATTCATGGTc > 2:14126/1‑251 (MQ=255) cGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATACGAGCGGAAAAAATGGTATTCATGGTCTGa < 1:11283/251‑1 (MQ=255) gTCATCATTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGGGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATACGAGCGGAAAAAATGGTATTCATGGTCTGAACTANGAc > 2:406496/1‑251 (MQ=255) tcatcaTTTTGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATACGAGCGGAAAAAATGGTATTCATGGTCTGAACTACgcc > 1:354677/1‑248 (MQ=255) tttGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAgg > 2:215302/1‑136 (MQ=255) tttGGTCAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAgg < 1:215302/136‑1 (MQ=255) cAGGCTGGCAGGATCGCAGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATAAGAGCGGAAAAAATGGTATTCATGGTATGAACTACGACATCCGTGATGGAAt > 1:239640/1‑251 (MQ=255) aGGCTGGCAGGATCGCAGCGGACCTCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTACGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGACGTGGTGAGCGCCAGGCGCTTCATGATACGAGCGGAAAAAATGGGGTTCATGGTTTGAACAACGACATACGTTATGGNAtt > 2:417448/1‑251 (MQ=255) | AAATCGGCCATGGCGACACAAGCATCGTTACCCGATTGCAGGTTAATACCGCGGATCAGCTGAGAAACCGGAACCTGCATGCCCGGTTTGAGGAACATCAGCGAAGAACCTTTAAACACCGGGTTACCGGTGGCCCATGCGTCGTTGCCGATAGTGACTAAATCAGTTTCTTTAAATTTACCGGCTTTCATTGCCTGGCCGATAACGTAACTGGTCATCATTTTGGTCAGGCTGGCAGGATCGCGGCGGACATCTGCGTTCTGTTCGGCGAGCACTTTGCCGGAGTTATAGTCAATCAGGATGTAGGACTCCGCATCGATCTGCGGTACACCCGGGATCATAGTTTTGATATTCAGGTCATCGGCATGTGCAGCAGAGATAAAGGCTGTGCAAAGAGCCGTGGTGAGCGCCAGGCGCTTCATGATACGAGCGGAAAAAATGGTATTCATGGTCTGAACTACGACATCCGTGATGGAATT > NC_000913/663515‑663993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |