| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 628,713 | G→A | D55N (GAC→AAC) | entA → | 2,3‑dihydro‑2,3‑dihydroxybenzoate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 628,713 | 0 | G | A | 95.8% | 141.9 / NA | 48 | D55N (GAC→AAC) | entA | 2,3‑dihydro‑2,3‑dihydroxybenzoate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (19/27); minor base C (2/0); total (21/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
ATGGTGATATCGACTTTGTCATGCTGGCGAAAAACCCGACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCATGAACCAGTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCA > NC_000913/628469‑628954 | aTGGTGATATCGACTTTGTCATGCTGGCGAAAAACCCGACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑CAAGGTACAGGGTTTGATCAAGCGCTCACTCAGGAGCAATA‑TCCCTTTTCGACCGAAGTGATGGCTGTTGCCAACGCTg > 1:135787/1‑251 (MQ=255) gATATCGACTTTGTCATGCTGGCGAAAAACCCGACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGGTTGTTGAGGCTGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCa < 2:205704/250‑1 (MQ=255) cGACTTTGTCATGCTGGCGAAAAACCCGACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGGG‑AAAGTTACCAGATTTGATTCAGCGTTTACTCAAGAGCAATA‑TCCCTTTGCGACCGAAATGATGGTTGTTGGCCACGCTGCGCAgtgcgc > 2:125075/1‑246 (MQ=255) gCTGGCGAAAAACCCGACCATCGACGCCTGGTGGCAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑CAAGTTACAGGGTTTGATCAAGCGTTCACTCAGGAGCAAAA‑TTCCTTTGCGACCGAAGTGATGGGTTTTGCCAACGATGCGCAGGTCGCGCAAGTGTGTcc > 1:164717/1‑250 (MQ=255) gCTGGCGAAAAACCCGACCATCGACGCCTGGTGGACGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGGCGCGCAAGTGTGTc > 1:123332/1‑250 (MQ=255) gACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGGGGTGAAATAATGGATGTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATGGGCTACGGCACGTCGGTGGCGTTTGTTGAGGCGGGAGCG‑AAAGGTACAGGGTTTGATCAAGCGTTCACTCAGGAGCAAGA‑TCCCTTTGCGACCGGAGTGATGGATGTTGCCAACTCTGCTCAGGTCGCGCAAGTGTGTCAGCTACTGTTAGCTGa < 2:269089/251‑1 (MQ=255) ccATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGaa > 1:25050/1‑250 (MQ=255) gACGCCTGGTGGAAGCTTCTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGGAAAGGTATCTGCTGCGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTTATCAAGCGTTCACTCAGGAGCTATA‑TCCCTTGGCGACCGAAGTGATGGATGTTGCCAACGTGGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAg < 1:292341/251‑1 (MQ=255) cGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGGGCG‑AAAGGTACAGGGTTTGATTAAGGGGTCCCTCAGGAGCAATA‑TTCCTTTGCGACCGAAGTGATGGATGTTGCCCACGCCGCGCAGGGCGCGCAAGAGTGTCAGCGGCTGGTTGGTGAAACggcggg > 1:298853/1‑247 (MQ=255) cTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGGG‑AAAGGTACAGGGTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGGCCGAAGTGATGGATGTTGCCAACGCTGCGCAGGGCGCGCAAGGGTGTCAGCGACTGTTAGCTGAAACGGAGCGACt > 1:353282/1‑251 (MQ=255) ggtggAAGCTACTATCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGGG‑GAAGTGAAAAGGTTTGAATAAGCGATAACTCAAGAGCAATAACCCCTTTG‑GAACGAAATGGTGGATGTTGCCAACGCTGAGCAAGACGGGCAAGTGTGGCCGCGGATGTTAGCTGAAAACGAGCGACttg > 2:103791/1‑249 (MQ=255) ggAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCGGCAAGT‑ACAGGGTTTGATCTAGCGTTCACACCGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGGCAAAGCTGCGCAGGGCGCGCAAGAGTGTCAGCGACTGTTAGCTGAAACCGAgacaccggg > 1:405544/1‑241 (MQ=255) aaGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGAcgcg < 2:82743/251‑1 (MQ=255) cTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGGTACAGGGTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGAACGAAGTGATGGATGTTGCCAAAGCCGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGGTGGAACGGAGAGACTGGGAGCGCTg > 2:344301/1‑251 (MQ=255) gctcacccGAGAGGTGGAAGAATGGATGGCAGCGGTAAAAATGTCTGGGCAACCGGCGCAGGTAAAAGTATCGGCTACGCCACGGCGCTGGCGCTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTTATCAAGCGTGCACTCAGGAGGAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTg < 2:7417/244‑1 (MQ=255) aGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑GAAGGTACAGGGTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTATGTCAGCGACTGTTAGCTGAAAAGGGGCGACTGGACGCGCTGGGCAATGcggcgg > 1:443457/1‑251 (MQ=255) gAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACTCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCTGCGGGAAt < 2:298853/251‑1 (MQ=255) aataatGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCCCGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAAttt < 2:427573/251‑1 (MQ=255) ggATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGGTTTGGACAAGCGTTCACTCAGGAGCAATA‑TCCCTTTTGGGCCGAAGTGGTGGATGTTGCCAACGCTGCGCCGGGTGCGCAAGGGTGTCAGCGACTTTTTGCTGAAACGGAGCGACTTGGCGCGCCGGGCAATGCGGCggggggttttcgac > 2:310758/1‑240 (MQ=255) ttCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATgg < 2:305542/250‑1 (MQ=255) ttCAGCGGTAAAAATGGCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTCCACTCAGGAGCAATA‑TCCCGTTGCGACCGAAGTGAGGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGTGAATTTTACGCATgg < 1:17633/250‑1 (MQ=255) cAGCGGTAAAAATGTCTGGGTAACCGGAGCAGGGAAATGTATCGGCTACTCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCTCAAGTGTGTCAGCGACTGTTAGCTGAAACCGAGCGACTGGACGCGCTGGTCAAGGCGACGTGAATTTTGCGCATTGgc < 2:437772/250‑1 (MQ=255) aTGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAg < 1:358811/251‑1 (MQ=255) aTGTCTGGGTAACCGGCGAAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGGTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTTCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGGCGCGCAAATGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGGATTTTACGCaatggggggaccggtc > 1:362848/1‑234 (MQ=255) gTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCt < 2:362848/251‑1 (MQ=255) gggTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCa < 2:273140/249‑1 (MQ=255) gaTCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGGGTTCACTCATGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACtt < 2:163656/250‑1 (MQ=255) aCGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGtt < 1:121132/251‑1 (MQ=255) gCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGc < 1:152825/251‑1 (MQ=255) tgttgAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCTGTTAACGTCGGCGGTGCGttt < 2:16578/250‑1 (MQ=255) gttgAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCGCGCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGGGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTa < 1:94185/250‑1 (MQ=255) aaGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTATGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAAcc < 2:443457/251‑1 (MQ=255) aGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCa < 2:78148/245‑1 (MQ=255) aGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTAAGCATGGGCGCGACCGATCAGCCCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGGTAAAGTCGGCGGGGCGGTTAAACT‑GGTCCAGCAAAcacagaacg > 1:78148/1‑243 (MQ=255) tCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCC‑GTTCCAGCAAACCATGAACCAGTTTCGcc > 1:88838/1‑251 (MQ=255) aaGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACtt < 1:132896/189‑1 (MQ=255) gTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCATGAACCAGTTTCGCCGTCAgc < 2:76231/251‑1 (MQ=255) aGGAGCAATA‑TCCCTTTGCGACCGGAGTGATGGATGTTGCCAACCCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTTAAGAGGACTGGCCGCAGACTTTTGCGGTTAACCTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCATCAACCACATTCGTCGTCCgcggggcggg > 1:387522/1‑251 (MQ=255) aGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCCTGAACCAGGTTCGCCGTCAACGgggcggggcg > 1:356533/1‑251 (MQ=255) aGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCATGAACCAGTTTCGCCGTCAGCGgggcggggcg < 1:230812/251‑1 (MQ=255) aaTA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCAAAGCTGCGCAGGTCGAGCAAGTGTGTCAGCGACTGGTAGCTGAAACGGAGCGACTGGAGGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCATGAACCAGTTTCGCCGTCAGCGGGGCGGGGCGAtt < 1:433503/251‑1 (MQ=255) ata‑tCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑g < 1:317116/202‑1 (MQ=255) aga‑nCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCATCTCAGTAAAGAGGACTGGCAGGAGAGTGTTGCGGTTAACGTCGGCGGTGCGTTTAACGT‑GTTCCAGCAAACCATGAACCAGTTTCTCCGTCAGCGTGGCGGGGCGATTg < 2:413361/249‑1 (MQ=255) a‑tCCCTTTGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACATTTGCGGTTAACGTCGGCGGTGGGTTTAAACT‑GTTCCAGCAAAACATGAAACAGTTTCGCCGTCAGcgggggggggggggtgtt > 1:355613/1‑243 (MQ=255) a‑tCCCTTTGCGACCGAAGTGATGGATGGTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGGATGTTACGCACGGGCGCGACCGATCAGCTCAGTAAAGAGGACAGGCAGCAGACTTTTGCGGTGAACGGAGTCGGGGCGGGTTACCTAGTTC‑AGCAAACCCTGAACCAATTTCGCCGTCAGCAgggcggggcggtatgg > 2:232125/1‑245 (MQ=255) tttGCGACCGAAGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGGTAACGTCGGCGGGGCGTTTAACCT‑GTTTCAGCAAAACATGAACCAGTTTCGCCGTCAGCGGGGCGGGGCGATTGTTACtct > 1:328765/1‑249 (MQ=255) aGTGATGGATGTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCATGAACCAGTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGAcg < 1:145674/251‑1 (MQ=255) gatgTTGCCAACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTTCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTTCAGCAAACCATGAACCAGGTTCGCCGTCCGCGGGGCGGGGGGATTGGCACTGTGGCGTCCGACGCCccgcc > 1:216234/1‑250 (MQ=255) | ATGGTGATATCGACTTTGTCATGCTGGCGAAAAACCCGACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCG‑AAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATA‑TCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCT‑GTTCCAGCAAACCATGAACCAGTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCA > NC_000913/628469‑628954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |