| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,697,484 | C→T | G186D (GGC→GAC) | hdhA ← | 7‑alpha‑hydroxysteroid dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,697,484 | 0 | C | T | 100.0% | 60.3 / NA | 20 | G186D (GGC→GAC) | hdhA | 7‑alpha‑hydroxysteroid dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (9/11); total (9/11) | |||||||||||
GTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGCCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAACACATTCAGTTCATAAGCACGGCGAAAATCCGCCATTGGCATATCA > NC_000913/1697249‑1697729 | gttgttTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAatat < 2:320941/251‑1 (MQ=255) gCTCCTGTACCCCGCCACCGGAGACGGTTAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATGTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTg < 2:50869/251‑1 (MQ=255) ccccACCACCGGAGACTGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGTGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCACGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATgt < 2:307262/251‑2 (MQ=255) agaCGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCTTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGTCCAGATGACTGGCCGCAGCt < 2:454583/251‑1 (MQ=255) aCGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTATCATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACTCCATATTTCTGACCAGATGACTGGCCGCAGCttt < 1:280483/251‑1 (MQ=255) cgcgtACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGaa < 2:225350/247‑1 (MQ=255) tACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATGGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTGCACCCATGTCAAACGCGATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGt < 1:272486/249‑1 (MQ=255) cagcagGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTAAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCCTTAGATGATGCATAGGAAGTCATGTTTTtattt > 2:82886/1‑251 (MQ=255) gcagGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCTGTTAATATTGCCCCCGTCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTAtattttt < 2:343578/251‑1 (MQ=255) cGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATg < 1:32179/251‑1 (MQ=255) gACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCCCCCAgg > 1:410089/1‑125 (MQ=255) gACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAgg < 2:410089/125‑1 (MQ=255) gtgtGCTGTAACGTTTTTTGTTAAATTTCTGGTGTGATACCGGATTTCAGGGCCTCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCTAGTTCAAACGCCCTATTCCTGACCAGATGACTGGCCGACGCTTTAGATGATGCATAGGAAGTCATGTTTATCTTTTTATTTTCTGCGGCCATAGTAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCAATTTCTGgcgc > 2:277347/1‑251 (MQ=255) tgtAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAac > 1:179753/1‑250 (MQ=255) ataaCGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAACACAtt > 2:277921/1‑251 (MQ=255) ccacgccgctctcccgatcttatTGCCCCCGGCGAAATGTCATTTCCCCGAATATTTTTTTCCCCCAGGTAAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGAAGGTCATTTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGACAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAACACATTCAGTTc < 2:454157/231‑1 (MQ=255) cATCGGTTAATATTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAACACATTCAGTTCATAAGCACgg > 1:417774/1‑251 (MQ=255) tatTGCCCCCGGCGCAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATCTTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAACACATTCAGTTc > 1:454157/1‑231 (MQ=255) gcAATGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAACACATTCAGTTCATAAGCACGGCGAAAATCCGCCATTGGc > 2:416209/1‑246 (MQ=255) aaTGTCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGCAAAATGAAAACACATTCAGTTCATAAGCACGGCGAAACTCCGCCATTGGCATATCa > 2:289426/1‑250 (MQ=255) | GTTGTTTACCGGTCCGTTAGTGTATTAATTGAGCTCCTGTACCCCACCACCGGAGACGGTGAGAATTTGTCCGCTTACCCAGCTCGCAGCAGGCGAGCAAAGGAACAGCGCTGCGTTAGCAATATCTTGCGGTTGGCCCAGACGTCTGATCGGCGTGTGCTGTAACATTTTTTGTTCAATTTCTGGTGTAATAACGGATTTCAGGGCATCGGTTAATATTGCCCCCGGCGCAATGCCATTTACCCGAATATTTTTTTCACCCAGGTCAAACGCCATATTTCTGACCAGATGACTGGCCGCAGCTTTAGATGATGCATAGGAAGTCATGTTTATATTTTTATTTTCTGCCGCCATAGAAGTGATGGTCAGAATAACGCCACCGCCATTTTTTTCCATTTCTGGCGCAACAAGTTGTGACAGATGGAAAAAAGAAAACACATTCAGTTCATAAGCACGGCGAAAATCCGCCATTGGCATATCA > NC_000913/1697249‑1697729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |