| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,794,304 | C→T | G283G (GGG→GGA) | btuC ← | vitamin B12 ABC transporter membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,794,304 | 0 | C | T | 91.2% | 93.1 / ‑3.2 | 35 | G283G (GGG→GGA) | btuC | vitamin B12 ABC transporter membrane subunit |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (19/12); total (22/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
GTGGTCACTTCACCGTCGATATCTTTCACTACGGTCGTCAGAATGGAATCTTGCATCGTTTCTCCTGGGTGTGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAAC > NC_000913/1794054‑1794550 | gTGGTCACTTCACCGTCGATATCTTTCACTACGGTCGTCAGAATGGAATCTTGCATCGTTTCTCCTGGGTGTGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCCGCAGCAATGCGCTC‑Gcc > 2:216871/1‑251 (MQ=255) tCACTTCACCGTCGATATCTTTCACTACGGTCGTCAGAATGGAATCTTGCATCTTTTCTCCTGGGTGTGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCt < 2:249703/250‑1 (MQ=255) cGATTTCTTTCACTACGGTCGTCAGAATGGAAACTTGCATCGTTTCTCCTGGGCGTGGTCAGTAAAAATCTTTGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTACTTTTAACAATAACCAGATAAACACCGGAACACCTAACGTTTCGGAGACCACCCCAATAGTCACCTCTGCGGCAGCTCATCCCAGGCGAGCTACAATATCGGACAACAGAAATGCGCTCCGTCCC‑GCCAGCGCGCAGc > 2:304928/1‑251 (MQ=255) atCTTTCACTACGGTCGTCAGAATGGAATCTTGCATCGTTTCTCCTGGGTGCGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCggg > 1:317737/1‑251 (MQ=255) cTTTCACTACGGTCGTCAGAATGGAATCTTGCATCGTTTCTCCTGGGTGTGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCTGGa > 2:285813/1‑250 (MQ=255) aTGGAATCTTGCATCGTTTCTCCTGGGTGTGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGtt < 2:229641/251‑1 (MQ=255) aaTCTTGCATCGTTTCTCCTGGGTGTGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAAc < 1:22019/251‑1 (MQ=255) ggTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGATCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGAt < 1:156413/250‑1 (MQ=255) ggTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATc < 1:261262/251‑1 (MQ=255) cAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCACGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCAcc > 1:40223/1‑251 (MQ=255) aaTCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAAGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATCCGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCa > 1:265051/1‑250 (MQ=255) aTCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGGAATACGCGATGCTCGGTTAAACCACACAACCGGCGAATATGGGGGATCACCAGACCAAt > 2:212149/1‑251 (MQ=255) cTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCCGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCAGGGAAGAAATAAGCGATGATCGGTTAAACAACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAACCg > 1:331280/1‑251 (MQ=255) aTCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAg < 2:347235/163‑1 (MQ=255) aTCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAg > 1:347235/1‑163 (MQ=255) aGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACCCCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCg < 2:87141/250‑1 (MQ=255) tGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACt > 1:188506/1‑251 (MQ=255) cGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGGGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGAGCCACACTGACGCCacc > 1:174237/1‑249 (MQ=255) ccTGCTTTTACCAAAAACAAGGTAAACACGGCCGCACTTAAGGTTGGGGTGACAGCGCCAATGGGCGGCTCTGCGGCAGCGAATGCCGGGCGCGCTAAAATCTCGGCCAGCAGCAAGGCGCTC‑GCCCCGGCCAGCGCGCGGCCGGGAAGTAATACGCGATAATCGGTAAACCCAAACAACGGGAAAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCAt < 2:102219/251‑1 (MQ=255) cTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGGCCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCGCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATcc > 2:83863/1‑249 (MQ=255) aCAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTc > 1:345722/1‑251 (MQ=255) aaaaCCAAATAACCCCCGCCGCACCTAACGTTGCGTGGCCCACGCAAATGGGCAGCTCTGCGGCAGCTAATGCCAGGCGGGCTACAATATCGGCCGCCAGCAATGCGCTC‑GCTCCTCCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTAAAACCACACAACCGGAAAATATGGGGGATCACCAGACCAATAAAGCCAATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCt < 1:236362/249‑1 (MQ=255) ccAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGcc > 1:321954/1‑250 (MQ=255) aaaCACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGccacccgc > 1:97196/1‑247 (MQ=255) cGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTgc > 1:330273/1‑251 (MQ=255) accgtggCGGGGACCACGCCAATAGGCAGCCCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAAGGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACca < 1:121117/245‑1 (MQ=255) cGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGCCGCCAACCATCCAGCCGGACGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGt > 2:288792/1‑251 (MQ=255) cGCCAAGAGGCAGCTCTGCGGCAGCAAATGCCAGCCGCGCTACAATAGCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGAGGATCGGTTAAACCACACAACCGGAGAAGATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGt < 1:285813/251‑1 (MQ=255) aaagggCAGCTCTGCGCCAGCAATTGCCAGCCGCCCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAGGTAATACGCAATAATCGGTTAACCCACACAACCGGAGAATATGGGGAATCCCCAGACCAAAAAAGCCGATGGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGcc < 2:333722/247‑1 (MQ=255) cAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTACACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCg > 2:361656/1‑251 (MQ=255) tAATGCCAGGCGCGCTAAAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTACACACAGTTGCCGCGCCGAGATCTCGCCAAGTg > 2:48021/1‑251 (MQ=255) aaTGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGc > 1:379363/1‑251 (MQ=255) aaTATCGGCCAGCAGCAATGCGCTC‑GCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGcc > 1:339709/1‑251 (MQ=255) agcagcAATGCGCTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGac > 1:17256/1‑250 (MQ=255) aaggcccTC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCCCACAACCGGAGAATAGGGGGGATCACCAGACCAATAAAGCCGATAGCCCCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGAt < 1:288792/245‑1 (MQ=255) tC‑GCTCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCacaac > 1:38624/1‑251 (MQ=255) | GTGGTCACTTCACCGTCGATATCTTTCACTACGGTCGTCAGAATGGAATCTTGCATCGTTTCTCCTGGGTGTGGTCAGTAAAAATCTTAGCTTTTAATCATAGACCGTCTTTTTGCGGCTAACGTCCTGCTTTTAACAATAACCAGATAAACACCGGCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTC‑GCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACACAACCGGAGAATATGGGGGATCACCAGACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAAC > NC_000913/1794054‑1794550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |