| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,595,740 | G→A | L222L (CTG→TTG) | livH ← | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,595,740 | 0 | G | A | 98.2% | 177.5 / NA | 55 | L222L (CTG→TTG) | livH | branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (41/13); minor base C (0/1); total (41/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAGCACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGCAGAGAAGTTTTCGCTATGCCCCACCACC > NC_000913/3595494‑3595981 | ccGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGAAGGGGTTAATGACGCCGTAGAACTGACCGAGCAacac > 2:338561/1‑250 (MQ=255) gggCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACAcc < 1:233866/251‑1 (MQ=255) gTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATcgc > 1:137549/1‑251 (MQ=255) cATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCgcgc > 1:261179/1‑251 (MQ=255) aTCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCCGCCAATCCC‑ACCGACCACCGCCGCGGTAAAGGCTTTCATCCCTGCCATACAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCCAGCAACACAGCCGCCACACCCGCCATGGCCGCGcc > 2:209903/1‑251 (MQ=255) agcagcACCAGAAGCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCACCGCCCCCGGAATGCTGCCAATCCC‑CCCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATcac < 1:111754/251‑1 (MQ=255) gcagcaCCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATACCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGCTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCTCCGCCATCGCCGCGACAATcac > 2:319555/1‑250 (MQ=255) agcaCCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACaa > 1:223933/1‑250 (MQ=255) aCCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGACGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACGAAgg > 1:83970/1‑250 (MQ=255) cagGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAACGGCTTTCATCCCGGCCATAAAGCCGATGAAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATc > 2:317619/1‑250 (MQ=255) aaTGAGACCACATCTTTATATTCCGTACTCAGA‑TAGACAGAAGAGAGCGACTCCGCCATCACCAGAATCAGGCCGCAAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGACAGCGCAATCACCcggtc > 1:184974/1‑251 (MQ=255) agaCCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGgtg > 1:63165/1‑251 (MQ=255) aCCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGtt > 2:211967/1‑251 (MQ=255) caTCTTTATATCCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAACCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAACCCC‑CCCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATg < 1:120895/251‑1 (MQ=255) ttATATTCCGTAC‑CAGAATAGGCAGAAGAGAGCGCCTCCGCAATCCCAAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAACCCC‑ACCGAGCACCGCCGCGGAAAAGGCTTTCACCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACCCACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGcc < 1:318966/248‑1 (MQ=255) tACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGcc > 1:356232/1‑251 (MQ=255) cAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCAttt > 2:314896/1‑251 (MQ=255) cAGA‑AAGGAAGAAGAGAGCGCCTCCGCAATCCCCAAAATCAGCCCGCCAATCACCGCTCCGGGAATGCTGCCAATCCC‑ACCGGGCGCCGCCGCGTTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGCCCGAGCAACACCCCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCAttt < 1:54060/251‑1 (MQ=255) tAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTc > 1:62094/1‑249 (MQ=255) gaagaGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGCGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTc > 1:391009/1‑251 (MQ=255) agagagCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATACAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCATATCTTCcg > 1:367251/1‑251 (MQ=255) accgcCCCCGCAACCCCCAGAACCAGCCCGCCACTCACCCCCCCCGGAATTCTCCCAATCCC‑CCCTAGCCCCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACCCCCCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCa < 1:338561/249‑1 (MQ=255) ccgcCTCCGAAATCCCAAGAAACAGGCCGCCAACCACCGCTCCCGGAATGCGGCCATGCCC‑CCCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGCCGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAg < 1:377756/250‑1 (MQ=255) cccAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACAcgcgcg > 1:252708/1‑251 (MQ=255) cagactaaGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCAGCGGTAAAGGCTTTCATCCCGGACATAAAGCCGATGTAGGGGTTAATGACGCCGAAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCAAAAAGGTCAGCACAATCACCCGTTCGGAGTTAATGCCAAGCAGACTCGCCATTGTCAGATCTTCCGCGAAGGCACGACACGCGAGAc > 2:362138/8‑251 (MQ=255) cAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGCTGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCAGCCATCGCCGCGCCAATCACAAAGGTCAGTGCAATCACCCGGTCGGAGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGc > 1:42453/1‑251 (MQ=255) ggCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCCTGCgg > 2:291061/1‑251 (MQ=255) ccgccAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCggg > 1:386546/1‑250 (MQ=255) cccatccatcGCTCCCGGAATGCTGCCAACCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAAt < 1:234746/245‑1 (MQ=255) cAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAAt > 1:200782/1‑249 (MQ=255) tcatcGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCg > 1:200551/1‑250 (MQ=255) cgcGCTCCCGGACTGATGC‑AATCCCCACCGACCTCCGCCCCGGTAAAGGCTTTCATCCCGGCCAGAAAGCCGATGTCGGGGTTAATGACGCCGTAGAACGGACCGAGCAACACCCCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTGCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAAt < 1:131904/249‑1 (MQ=255) gAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTc > 2:170120/1‑251 (MQ=255) ccccGAGCACCGCCGCGGTAAAGGCTTTCACCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCg < 1:299589/249‑1 (MQ=255) cGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACCCCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAgg < 1:195827/251‑1 (MQ=255) cGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAgg > 1:337652/1‑251 (MQ=255) aGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGa > 2:356674/1‑250 (MQ=255) aCCGCCTCGGTAAAAGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGAGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATATTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGAGAATGAAAATCGACAGCGCCAGCATGGCGAGGAAgg > 1:129552/1‑250 (MQ=255) aCCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCCATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAggg > 2:402402/1‑250 (MQ=255) ggTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATcc > 1:5639/1‑251 (MQ=255) ggCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGACCTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCa < 1:177037/251‑1 (MQ=255) aaTCCCGGCCATAAAGCCGATGGAGGGGGTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCCCCGCCATCGACGCGCCAATCACAACAGTCAGCGCAATCAACAGATCGGTGTTAACGCCAAGCAGACTCACCATTTTCCCATCTTCCGAGCAGGAAAGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCATCAGCGCCAGCATGAAGAGGAAAGTAACAATCCAGATCAccaca > 2:356984/2‑247 (MQ=255) aTCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGGATAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCACTCACAAAGGTCAGCGCCAGCACCCGGTCGGTGATAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCTAATGCAAATCGTCAGCTCCAGCATGGCGAGGAAGGGAACAATCCAGATCACCGCCTg > 2:134240/1‑251 (MQ=255) gCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGCTCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGAGAATGAAAATCGTCAGCGCCa > 2:302083/1‑208 (MQ=255) aaaaaGCCGATGGAGGGGTTAATGACGCCGTAAAACTGACCGACCAACCCACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAgg < 2:191500/218‑1 (MQ=255) aTAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAgg > 1:191500/1‑220 (MQ=255) aTAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGAAACACACCCGCCACCGCCGCCATCGCAGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGCAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCAtggtggg > 2:13948/1‑250 (MQ=255) tGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCCGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGc > 1:285399/1‑250 (MQ=255) gggtttaacgccGCCGTAAAACTGACCAAACACCACCCCCGCCCCCGCCGCCATCCCCGCGCCAATCACAAAGGTCAGCGCAATCCCCCGATCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGCCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGCAgaga < 1:229665/240‑1 (MQ=255) ggggTTAATGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGCag > 2:82931/1‑248 (MQ=255) aatgcccccgaaGAACAGACCAAGCAACACACCCGCTACCGCCGACATCGCCGCGCCAATCACAATGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCACGCAGAACCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGTGGGAATAGCGAATGAAAATCGTCAGCGCCAGAAAGGCGAGGAAGGAAACAATCCAGATCACCGCCAGCATGGGGGTAATAGAGGCAGAGAAGtttt > 2:386257/12‑251 (MQ=255) aTGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCCCAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGCAGAGAAGTTTTc > 2:189394/1‑251 (MQ=255) tGACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCAGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGCCTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGCAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACAGCCTGCATGGCGGTACTAGAGGCAGAGAAGCTTTCg > 2:249730/1‑251 (MQ=255) gACGCCGTAGAACTGACCGAGCAACACACCCGCCACCGCCGCCATCGCCGAGCCAATCACAAAGGACAGCGCAATCACCCGGTCGGTGTTACTGCCAAGCAGACTCGCCATTTTCCGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGTAGGTAACAATCCAGATCACCGCCTGCATGGTGGTACTAGAGGCAGAGAAGTTTTCGc > 1:377661/1‑251 (MQ=255) gACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGCAGAGAAGTTTTCGCTATGCCCCaccacc > 1:304755/1‑251 (MQ=255) gACCGAGCAACACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGCAGAGAAGTTTTCGCTATGCCCCaccacc > 1:382212/1‑251 (MQ=255) | CCGGGCGACCCAGAATACCGGTCGGCATCACCAGCAGCACCAGAATCAGCAGGGCGAATGAGACCACATCTTTATATTCCGTACTCAGA‑TAGGCAGAAGAGAGCGCCTCCGCAATCCCCAGAATCAGGCCGCCAATCATCGCTCCCGGAATGCTGCCAATCCC‑ACCGAGCACCGCCGCGGTAAAGGCTTTCATCCCGGCCATAAAGCCGATGTAGGGGTTAATGACGCCGTAGAACTGACCGAGCAGCACACCCGCCACCGCCGCCATCGCCGCGCCAATCACAAAGGTCAGCGCAATCACCCGGTCGGTGTTAATGCCAAGCAGACTCGCCATTTTCAGATCTTCCGCGCAGGCACGACACGCGCGACCCATGCGGGAATAGCGAATGAAAATCGTCAGCGCCAGCATGGCGAGGAAGGTAACAATCCAGATCACCGCCTGCATGGTGGTAATAGAGGCAGAGAAGTTTTCGCTATGCCCCACCACC > NC_000913/3595494‑3595981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |