| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,496,485 | G→A | E825E (GAG→GAA) | nirB → | nitrite reductase (NADH) large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,496,485 | 0 | G | A | 98.5% | 228.8 / NA | 67 | E825E (GAG→GAA) | nirB | nitrite reductase (NADH) large subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (32/34); minor base T (0/1); total (32/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGACTGATTGCGG > NC_000913/3496239‑3496731 | tGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAAcgcg > 1:192644/1‑251 (MQ=255) gCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAacgc < 1:67587/249‑1 (MQ=255) cAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGc > 1:285014/1‑251 (MQ=255) aaaCTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCATTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACGCTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCa < 1:247723/251‑1 (MQ=255) gACGCGTACCGCACCGTGGTTAGAAAGCCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGTGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGt < 2:242834/250‑1 (MQ=255) gTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCGCCGTCCGGCa < 2:408626/251‑1 (MQ=255) gCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGcc < 2:153397/251‑1 (MQ=255) gTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATg > 2:408373/1‑251 (MQ=255) ccTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTGCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAg < 2:138880/251‑1 (MQ=255) aGGCGGGATCGATTACCTGAAAGCAGTGATCAGTGACGACAAACTGGTGCTGAACGCACATCTTGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCCATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCATATCGCGAACAGGGCCTTCCGTCAACGCCGTATGAACGTATCCCTGTAActc < 2:54055/251‑1 (MQ=255) ggcggcATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAActct < 2:206796/251‑1 (MQ=255) cggcATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTCACTCtgg > 1:268655/1‑251 (MQ=255) ggcATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCtggg > 1:323524/1‑250 (MQ=255) tCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCtggtgg > 2:154965/1‑249 (MQ=255) cccTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGAATGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGGCCGGCAACTCCGTATGAACGCATCCCAGTAACTCTGGTGGAGGAcccc < 2:238886/250‑4 (MQ=255) aCCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAAc > 1:81140/1‑251 (MQ=255) cAGTGATCATTGACGACAAACTGGGGCTGAACGCCCATCTGGAAGAAGAGCTGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGAGGAGGACAACGCATGAGcc > 2:70741/1‑251 (MQ=255) agttaTCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCa < 1:228509/247‑1 (MQ=255) aGTGATCATTGACGACAAACTGGGGCTGAACGCACATCGGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCTCAGACGCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAGCGCTGGTGGAGGACAACGCATGAGCCa < 2:412444/251‑1 (MQ=255) aGTGATCATTGACGACAAACGGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCa < 2:390499/251‑1 (MQ=255) gATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAAATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTg > 1:133769/1‑251 (MQ=255) acgacAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACa < 2:257442/251‑1 (MQ=255) cAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTg < 1:173953/251‑1 (MQ=255) aaaCTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACTCCGTATGAACGTATCCCAGTACATCTGGTGGTGGACAACGCATGAGCCAGTGGAACGACATcagc > 2:330162/1‑248 (MQ=255) gAACGCACCTCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTGCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCCGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGCGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGAt < 2:3597/249‑1 (MQ=255) gAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATg < 2:351309/250‑1 (MQ=255) cacaTCTGGAATAAGAGATGGTGCGCCGGCGTGAAGCGGTACTGTGTGAGTGGACTGAATCGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGGACGTATCCCAGTAACTCTGGTGGTGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAAGCGATGACATcc < 2:86449/251‑1 (MQ=255) tGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATcctgcctg > 1:387209/1‑251 (MQ=255) ggAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGa < 1:216591/251‑1 (MQ=255) aagnagAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCAAGGGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGaaa < 2:369661/251‑1 (MQ=255) gaagaGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAAcc < 1:148943/251‑1 (MQ=255) gcgcCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTg > 2:176271/1‑200 (MQ=255) gcgcCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTg < 1:176271/200‑1 (MQ=255) aaGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTg < 1:408373/251‑1 (MQ=255) tACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGc > 1:5796/1‑251 (MQ=255) tgtgtgAGTGGACTGAAACGGTCAATACTCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGCACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATAGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGAc > 1:189460/1‑244 (MQ=255) tgtgtgAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCAGCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTTAAACCGGCGTCTGCGCGCTGTTAGGTGAc < 2:189460/244‑1 (MQ=255) gtgtgAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAggg > 2:8501/1‑250 (MQ=255) gTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGTCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGAt < 1:367117/251‑1 (MQ=255) gACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGAtttt < 2:218048/251‑1 (MQ=255) gAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGc > 2:287471/1‑251 (MQ=255) aCGGTCAATACGCCGTATGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCTCAACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCATCCGGCACCGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACACCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGAGACGAGCAGGTCGCGATTTTCCGCCCg > 1:195145/1‑251 (MQ=255) caacaCGCAGTCTGCGCAGACTCGCTTCAAACACATCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCAGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAAAGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGTGCTGTTAGGTGACGAGCAGGTCGCGATTCTCCGCCCGTATc < 2:47589/246‑1 (MQ=255) cAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATc > 1:44034/1‑250 (MQ=255) aTACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATcaca < 2:156069/251‑1 (MQ=255) ccGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGAt > 1:179738/1‑251 (MQ=255) gTCTGCGCAGCCTGGCTTCAAGCACTTCATCAACAGCGACAAGCGTGACCCGACCGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTTTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGACTGACACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCACGTATCACAGCGATc > 2:185976/1‑250 (MQ=255) gTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATc > 1:15178/1‑250 (MQ=255) gcgcAGACTCGCTTCAAACACTTAAGCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAg < 2:282033/248‑1 (MQ=255) aCTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCg > 1:117801/1‑251 (MQ=255) cGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATc < 2:5796/251‑1 (MQ=255) gCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATc > 1:161201/1‑250 (MQ=255) aaCACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACa < 2:192644/251‑1 (MQ=255) tcataaACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCCGAACGCGAACCGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTCACTCTTGTGGAGGACAACGCATGCGCCAGTGGAAAGACATCTGCAAAATCGATGCCATCCTGCCTGCAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGCGTTTGCGATCAGCAACATCGAcc > 2:38199/1‑251 (MQ=255) catcaACAGCTACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGAccc < 2:117801/251‑1 (MQ=255) caACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGtt > 1:209501/1‑251 (MQ=255) aaCAGCGACAAGCGGGACCCGAACGTGCAGATGGTGCTCGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGAAGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGttc < 2:133769/251‑1 (MQ=255) aaGCGTGACCCGAACGTGCAGATGGTGGCATAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTcc < 2:331300/251‑1 (MQ=255) gTGACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGGTTGCGATCAGCAACATCGACCCGTTCTTCGATTCCAGCg < 1:108974/251‑1 (MQ=255) gACCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGt < 1:72779/250‑1 (MQ=255) aCCCGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGc > 2:21960/1‑251 (MQ=255) cGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGt > 1:406621/1‑251 (MQ=255) cGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGt > 1:228743/1‑251 (MQ=255) cGAACGTGCAGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGt < 1:94070/251‑1 (MQ=255) aGATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGAc > 1:85649/1‑251 (MQ=255) gATGGTGCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGACt > 2:340468/1‑251 (MQ=255) gCCAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGTAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGACTGATTGc > 1:134096/1‑251 (MQ=255) cAGAACGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGACTGATTGCgg > 1:238071/1‑251 (MQ=255) | TGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGACTGATTGCGG > NC_000913/3496239‑3496731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |