| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,536,236 | IS5 (+) +4 bp | intergenic (‑2183/‑358) | topAI ← / → ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 34 (0.840) | 33/488 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4536236 = | 0 (0.000) | intergenic (‑2183/‑361) | topAI/ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 22 (0.540) | 20/490 | 0.9 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4536239 | 0 (0.000) | intergenic (‑2186/‑358) | topAI/ythB | toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB | |||||
TTGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCC > NC_000913/2288670‑2289163 | ttGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGTCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATa‑ag < 1:181703/250‑1 (MQ=255) cAATTTGATAACCGTCATTTAATACTGAGTAGTCTGCGGCGCCATTCATTTCAATTAACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCTGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGt < 2:243520/251‑1 (MQ=255) aTAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATa < 1:192410/251‑1 (MQ=255) ggcgCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGCTATCTTTTTCCAGGACAACACCATCAACTGTCTCACCCTACTCAACAGTTTATGCCAATGCTATGGGTGAATATA‑AAGAAAGTGCGAATAAGCGGGGAAATTCTTCTCTGCTGACttcgt > 2:307924/1‑247 (MQ=255) ggcgCCATTCATTTCAATGTACTGATACCATCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTGGAGATCTTTTTCCAGGAAAACACCATTAAATGTCTCACCATACTCAACAGGTGTAGTCAAAGGTAAGGGGGAAT‑TATAGGAAGGTGCGAAAAAGCGGGGGAATGCTTTTCTGCTGGCTCAgg > 1:2581/1‑250 (MQ=255) catgaagacatgaaaTGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTCCACCAAATTCTTTTCTATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTTCCATAAACCAGCTGGATATCTTTTTTCCGGAAAACACCATCAACTGTCTCACCATACTCAACAGTTGTTGCCCATGCTATGGGTGGATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGGCTGACTCAGttc > 2:193775/14‑249 (MQ=255) attTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATTCTCATCAGTTGATGCCAATGCTATGGTTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt < 1:416444/251‑1 (MQ=255) gTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATg < 1:193775/250‑1 (MQ=255) aCTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt < 1:75254/251‑1 (MQ=255) cttacACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCATCTGGATATATTTTTCCAGGAAAACAACAACAACTGTCTCACCATACTAAACAGTAGATGCCAATTCTATGGGTGAATATA‑AGGGAGGTGAGAATAAACGGGGTAATTCTTCTTGGCTGACTCAATCATTTCATTTCTTCATGTTTGAACCGATTTTTTCTCCCGTAAATGCCTTgc > 2:238180/1‑249 (MQ=255) ttNTATGCTGTTCTCCTCCAGGATTTATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCGTTTTCCAGTACAACACCATCAACTGTCTCACCATACTCAACAGTGGATGCCAGTGTTATGGGTGAATATA‑AGGAAGGTGCGAGTAAGCGGGGAAAGTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGGTTTAGCCGATTTTTTCTCCCGTGAAAGCCTTGAATTAGCCTATTTAGAc < 2:370254/250‑1 (MQ=25) tataTGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCCTTTCATTTCTTCATGTTTTAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCg > 1:363502/1‑251 (MQ=255) atatGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCCGGACAACACCATCAAATGTCTCCCCATACTCAACCGTTTATGGCAATGCTATTGGTGAATATA‑AGGAAGGGGCGAATAAACGGGGAAATTCTTTTCGGGTGACTGAGTCATTTCCTTTCTTCATGTTTTAGCCGATTTTTTTTCCCGTAAATGCCTTTAATCAGACTAATTTGACCGt > 2:131252/1‑251 (MQ=255) gCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCTAAACCAGCTAGATATCTTTTTCCAGGACAACACCATCCACTGTCTCCCCATACTAAACAGTTTATGCCAATGCTATGGGTGTATATT‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTTTTCATGTTTTAGCCGGTTTTTTCTTCCGTAAATGCCTTTAATCTGCCTATTTAGACCGTttct > 1:56026/1‑251 (MQ=25) attgattTTCGTATTATTGGCGGTCCCATAAACCAGCTCGATATCTTTTTTCAGCACAACACCCTCAACTGCTTCACCATAATCAACAGTTGATGCCCATGCAATGGGGGGATATT‑AGGAAGGGGCGAAAAAGCGGGGAAATTCTTTTCCGCTGCATCAGTCATTTCATTTCTTCATGTTTGAGCCGGTTTTTTTTCCCGTCAATTTCTTTAATCAGCCTATTTTGACCCTTTCTTTCCCACTTAAGGCGt > 2:185251/1‑251 (MQ=16) gattTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTa < 2:123383/250‑1 (MQ=255) attGGCGGTCCCAGAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTa < 2:287499/251‑1 (MQ=255) aTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtctctc < 1:115220/251‑1 (MQ=255) aaCCAGCTGGAAATCTTTTCACGGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGAGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTAATTTCTTCATGTTTGAGCCGCTTTTTTATCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTccc > 2:239005/1‑250 (MQ=18) cAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTg > 1:201409/1‑251 (MQ=255) ggATATCTTTGTCGAGGAAAACGCCAGCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTATTGAGATCCCGCCCACTGACg < 2:304041/249‑1 (MQ=17) ccAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCg < 1:131252/251‑1 (MQ=255) ggACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGAATCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCGCACTGACGTATCATTTGGTCCGccc > 1:385870/1‑251 (MQ=255) cATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGt < 1:129008/251‑1 (MQ=255) aTCAACTGTCTCACCATACTAAACAGCTGATGAGAATGCTATGGGTGAATATA‑AGGAAGGTACGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCAGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATACCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGTCCGAAACAggat > 1:139118/1‑249 (MQ=14) cAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTAGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACTGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGcc > 1:64053/1‑250 (MQ=255) aTGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGt > 1:84630/1‑251 (MQ=39) aaTGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTccc > 2:68367/1‑183 (MQ=40) aaTGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTccc < 1:68367/183‑1 (MQ=40) gggTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCa < 1:8618/250‑1 (MQ=33) gTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGc > 1:310603/1‑250 (MQ=32) gTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTGTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCTACTGACGTATCATTTGGTCCGCCCTAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCatca < 1:47429/251‑4 (MQ=12) gAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCaa < 2:84630/250‑1 (MQ=32) atatA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCACACTGCCGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAAccc > 1:248190/1‑251 (MQ=14) | TTGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATA‑AGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCC > NC_000913/2288670‑2289163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |