Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,792,772	IS2 (–) +5 bp	intergenic (‑41/+33)	nlpC ← / ← btuD	NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1469240	NA (NA)	23 (0.840)	20/486	0.4	100%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	1792772 =	0 (0.000)					intergenic (‑41/+37)	nlpC/btuD	NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit
*	?	NC_000913	= 1651548	NA (NA)	21 (0.760)	19/490	0.5	95.4%	noncoding (706/706 nt)	IS2	repeat region
	?	NC_000913	= 1792776	1 (0.040)					intergenic (‑45/+33)	nlpC/btuD	NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit

GCATCGTCACAACCACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTGCTG  >  NC_000913/1792521‑1793018                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                       gcATCGTCACAACCACAAATCCCGAACAGTCCACCCCTCGCCGCGTCATGCCACCATAACGTTACGGCGTGCCATGCCAGCTTTTTAGCTGGTCGTTCAAACCGGCAATAACGTTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACTCATTCCTTACGGTTCCTCT‑TTTTTTATTCTTGCATTAATTTAg                                                                                                                                                                                                                                                        <  2:158701/251‑1 (MQ=255)              ccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTAc                                                                                                                                                                                                                                            >  1:104381‑M2/239‑251 (MQ=255)              cacaAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGTTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttg                                                                                                                                                                                                                                            >  1:149163‑M2/1‑243 (MQ=255)                  agaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCg                                                                                                                                                                                                                                         >  1:180731‑M2/235‑250 (MQ=255)                   aTCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccct                                                                                                                                                                                                                                       >  1:222928‑M2/1‑238 (MQ=255)                                    gctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagagtcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAAt                                                                                                                                                                                                                        <  1:270497‑M2/33‑1 (MQ=255)                                                  gCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGGGGCTACACCCGGCCAGAAGCAGTGCTGGGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTTTTGCATTAATTTAACGTCtggatttgcccctctatttccagacatctgttatcacttaaccc                                                                                                                                                                                                        <  2:63955‑M2/251‑45 (MQ=255)                                                   ccacccTAACGATACGGCGTGCCATGCTAGCTTTGTAGCTGGACGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTATGGCATTTGGCGGCGGGGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGACACGCATTTCGTACGGGTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttacccctatattttcacacaactgttatcacttaaccc                                                                                                                                                                                                        <  2:264838‑M2/250‑45 (MQ=255)                                                                 cGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCAGTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcactttacccattacaagcccgctg                                                                                                                                                                                         >  2:81759‑M2/1‑192 (MQ=255)                                                                      tcatccccggttaaaagctctgctgaacaattgcgatcttttcctgtgtggaacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACACGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCtt                                                                                                                                                                                    >  2:138157‑M2/183‑251 (MQ=255)                                                                       catccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtcgaaaaactagtattaagactatcacttagtgaagtgatattggttgtcgggagattcagggggccagtctaGCGTCGTAATGACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCtt                                                                                                                                                                                    <  1:179995‑M2/69‑1 (MQ=255)                                                                                   aaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACg                                                                                                                                                                       >  1:213058‑M2/170‑251 (MQ=255)                                                                                        tctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGa                                                                                                                                                                   >  1:79157‑M2/165‑250 (MQ=255)                                                                                                                cctgtgtgggacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTAATCCCATAGGCCTGCGcc                                                                                                                                           >  2:147463‑M2/141‑250 (MQ=255)                                                                                                                         aaTCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGTCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt                                                                                                                                 <  1:94806‑M2/251‑116 (MQ=255)                                                                                                                               aaaGTCTGGCATTTGGCGGCGGGGCTTTATGTTGGCTACCCCCGGACAGAAGAAGCGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatattttcagacatctgttatcacttaacccattacaagcccgctgccgccgatatttccgtggcgagcgataacccagcgcactatgcggatgcccttcgttataat                                                                                                                           <  1:280452‑M2/251‑122 (MQ=255)                                                                                                                                  tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctacaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGc                                                                                                                         >  2:282139‑M2/123‑250 (MQ=255)                                                                                                                                                cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGt                                                                                                          <  2:79837‑M2/143‑1 (MQ=255)                                                                                                                                                 ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCCAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTc                                                                                                         >  1:34605‑M2/108‑251 (MQ=255)                                                                                                                                                         ttATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt                                                                                                 <  1:209571‑M2/251‑148 (MQ=255)                                                                                                                                                          tATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAACTAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgaggatgccattcgttataatgctcgaacacctatgcaaggttctttg                                                                                                <  1:267929‑M2/251‑149 (MQ=255)                                                                                                                                                             tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGc                                                                                              >  1:283239‑M2/96‑250 (MQ=255)                                                                                                                                                                   gttctccaatgacgagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCAtttt                                                                                         <  2:114564‑M2/160‑1 (MQ=255)                                                                                                                                                                                   tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAAcc                                                                        >  1:469‑M2/74‑250 (MQ=255)                                                                                                                                                                                      aaaaactagtattaagactatcacttatttaagtgctattggttgtctggagattcagggcgccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGAACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGc                                                                    >  2:179687‑M2/71‑251 (MQ=255)                                                                                                                                                                                                aaaaTAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTCATTTCGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgaggcgagcgataacccagcgcactatgaggatgccattcgttatactgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgctactgatg                                                          <  1:175152‑M2/251‑187 (MQ=255)                                                                                                                                                                                                    tAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagt                                                      <  2:187087‑M2/251‑191 (MQ=255)                                                                                                                                                                                                    tAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatact                                                              >  1:223695‑M2/1‑61 (MQ=255)                                                                                                                                                                                                    tAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatact                                                              <  2:223695‑M2/243‑183 (MQ=255)                                                                                                                                                                                                    tAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattccagtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagt                                                      <  1:274517‑M2/251‑191 (MQ=255)                                                                                                                                                                                                            aaaCGCATTCCGTACGGTTCCTCTGTTTGTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaccccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggaggccattcgttataatgctcgaacgcctctgcaaggttttttgctgccgttaacccgtctggtttgggcatgatactgctgtagtcacgctt                                               >  2:280452‑M2/1‑53 (MQ=255)                                                                                                                                                                                                             aaCGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgcttt                                              <  1:96062‑M2/250‑199 (MQ=255)                                                                                                                                                                                                              aCGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttat                                            >  1:264838‑M2/1‑51 (MQ=255)                                                                                                                                                                                                                     agtgatattggttgcctggggattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTg                                        >  1:65183‑M2/40‑248 (MQ=255)                                                                                                                                                                                                                               ccTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctc                            >  1:187087‑M2/1‑34 (MQ=255)                                                                                                                                                                                                                                 tgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCtc                         >  2:150159‑M2/28‑251 (MQ=255)                                                                                                                                                                                                                                 tgtctggagatgcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGACATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGACCAGCATTTTTCCACCTTTTAGCAACAACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCtc                         >  1:174305‑M2/28‑251 (MQ=255)                                                                                                                                                                                                                                         ttATTCTTTCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgtgcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattc                  >  1:52957‑M2/1‑24 (MQ=255)                                                                                                                                                                                                                                                  ggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTcc        <  1:150159‑M2/241‑1 (MQ=255)                                                                                                                                                                                                                                                  cATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggctagcgataacccagcgctctatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgtttacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctc        >  1:278430‑M2/1‑15 (MQ=255)                                                                                                                                                                                                                                                     tAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccgg     <  2:17557‑M2/251‑240 (MQ=255)                                                                                                                                                                                                                                                       gtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGGCAGTCCTTGCt   <  2:34605‑M2/246‑1 (MQ=255)                                                                                                                                                                                                                                                       gtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTGCt   <  2:283239‑M2/246‑1 (MQ=255)                                                                                                                                                                                                                                                         ctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTGNTg  >  2:253764‑M2/4‑250 (MQ=255)                                                                                                                                                                                                                                                         ctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTGCTg  >  2:280474‑M2/4‑250 (MQ=255)                                                                                                                                                                                                                                                           aGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTGCTg  <  1:282139/248‑1 (MQ=255)                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                       GCATCGTCACAACCACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGACTGCTCATCACAATCGCCAGTCCTTGCTG  >  NC_000913/1792521‑1793018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.