Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 931,091 T→C A320A (GCA→GCG trxB ← thioredoxin reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913931,0910TC97.3% 119.7 / ‑4.0 37A320A (GCA→GCGtrxBthioredoxin reductase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (21/15);  total (21/16)
Fisher's exact test for biased strand distribution p-value = 4.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01

ATGATCAATATGCCGCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGAC  >  NC_000913/930847‑931335
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
aTGATCAATATGCCGCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCa                                                                                                                                                                                                                                                <  2:86800/251‑1 (MQ=255)
  gATCAATATGCCGCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGc                                                                                                                                                                                                                                              >  1:192140/1‑251 (MQ=255)
    tCAATATGCCGCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCt                                                                                                                                                                                                                                             >  1:131220/1‑250 (MQ=255)
                 cacaAAGCCCAGCCGGCGAGAAATCTTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGt                                                                                                                                                                                                                                >  2:224589/1‑250 (MQ=255)
                       gCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTGTTGTTACTGATTTGTAAAATTAGTACGCGTCAGCTAATCCAGCGAGGTAGCGTTc                                                                                                                                                                                                                         <  2:371631/251‑1 (MQ=255)
                       gCCCAGCAGACGAGAAATATTCAGCCAACCTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTc                                                                                                                                                                                                                         <  1:293813/251‑1 (MQ=255)
                                       atatTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGcc                                                                                                                                                                                                         >  1:15320/1‑251 (MQ=255)
                                               ccAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGcc                                                                                                                                                                                                 >  2:128140/1‑251 (MQ=255)
                                               ccAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGcc                                                                                                                                                                                                 >  1:1616/1‑251 (MQ=255)
                                                    gTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTAc                                                                                                                                                                                            >  1:139706/1‑251 (MQ=255)
                                                                         gTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGc                                                                                                                                                                       <  1:247128/251‑1 (MQ=255)
                                                                                              ctTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATTCATCAc                                                                                                                                                    <  2:325880/249‑1 (MQ=255)
                                                                                                    gACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTg                                                                                                                                            <  2:331226/251‑1 (MQ=255)
                                                                                                      cGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCg                                                                                                                                          <  2:160348/251‑1 (MQ=255)
                                                                                                        agaTTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGc                                                                                                                                        >  2:326865/1‑251 (MQ=255)
                                                                                                        agaTTGATTCATTGCACTCGTAGCAGGTGAGTTATCATAATTATTTGCATAGCAATGGTACAACTGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTTCTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTATCGTTCCGCATCAAGTGCTGCCATTCAGCCTGTCCCTTCCGAAGTAATTGACTTGCGATAAATGTGATCCAGCACGTCTCCTGCGGc                                                                                                                                        <  2:348240/251‑1 (MQ=255)
                                                                                                             tATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCaa                                                                                                                                      >  1:228728/1‑248 (MQ=255)
                                                                                                             tATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCaa                                                                                                                                      >  1:82190/1‑248 (MQ=255)
                                                                                                                              gCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTc                                                                                                                  >  2:106269/1‑251 (MQ=255)
                                                                                                                              gCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTc                                                                                                                  >  2:276857/1‑251 (MQ=255)
                                                                                                                                aGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGGCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAAGGTGATCCAGCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTg                                                                                                                <  1:187430/251‑1 (MQ=255)
                                                                                                                                                  attTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGAATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAAt                                                                                              >  2:345913/1‑251 (MQ=255)
                                                                                                                                                      gCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATAccc                                                                                          <  2:81168/251‑1 (MQ=255)
                                                                                                                                                              aTGTTCCAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCGGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCGGGTCTGGGTGGCATTACCATGAATACCCGACTGTAc                                                                                  <  2:115388/251‑1 (MQ=255)
                                                                                                                                                                  tACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTg                                                                              >  1:275597/1‑251 (MQ=255)
                                                                                                                                                                                      ggCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTttccagttc                                                          >  1:22498/1‑251 (MQ=255)
                                                                                                                                                                                              aTAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGcc                                                  >  1:72074/1‑251 (MQ=255)
                                                                                                                                                                                                   cGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTc                                              <  2:341233/250‑1 (MQ=255)
                                                                                                                                                                                                     cATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCCTTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGa                                            >  2:154790/1‑250 (MQ=255)
                                                                                                                                                                                                      aTGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGaaa                                          <  1:128140/251‑1 (MQ=255)
                                                                                                                                                                                                             cGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAg                                   <  1:276857/251‑1 (MQ=255)
                                                                                                                                                                                                              gcattcttTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCAGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGATGCCCTTCGAAAATCGc                                     >  2:336450/4‑248 (MQ=255)
                                                                                                                                                                                                                  tcttTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCTTCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTAtt                               <  1:139662/250‑1 (MQ=255)
                                                                                                                                                                                                                  tcttTACTTTTGTTACTGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTATTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAACTCGCAGTATTc                              >  2:14839/1‑251 (MQ=255)
                                                                                                                                                                                                                                  tGATTTGTAAAATTATTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGAt                >  1:244161/1‑249 (MQ=255)
                                                                                                                                                                                                                                           aaaatattTTCGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCaacaaac      <  2:197593/247‑1 (MQ=255)
                                                                                                                                                                                                                                              ttattTCGCTTCAGCTAAACCATCGAGGTAGCGTTCCGAATCAAATGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGCTGTAGCCGTTTTCCAGTTCCAGCTGCACTTCGAAAATCGCAGTATTCGGGCTGTGACAGATAGCAACAAACAGAc  >  1:239563/1‑251 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                     
ATGATCAATATGCCGCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCGCCTTCTTTACTTTTGTTACTGATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGAC  >  NC_000913/930847‑931335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: