| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 815,815 | G→A | A278V (GCC→GTC) | ybhK ← | putative transferase YbhK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 815,815 | 0 | G | A | 80.8% | 54.8 / ‑4.9 | 26 | A278V (GCC→GTC) | ybhK | putative transferase YbhK |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (13/8); minor base C (0/5); total (13/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.91e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTG‑TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGC > NC_000913/815577‑816061 | ggAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTG‑TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTAcct < 2:357396/251‑1 (MQ=255) aCGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTG‑TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGctct > 2:80241/1‑251 (MQ=255) cgcggcaaaattttaattttgtgggTTTGGTAGGCCGGAAAAGGGGTTAACGCCGCATCCGGAATAAACAACGCGCTCTTTGTCTTAAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGAACCGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTAATGACGATACGGAATATCGTTGACCTCCAGTCCCTCCGGGAGCACAATCCGCTCTTTCACCGCCGAGACATCCACtt < 2:253495/228‑1 (MQ=255) gAATTTGCGCGGTTTG‑TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATg > 1:231827/1‑251 (MQ=255) cccattcttAGGCCGGATAGGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACGGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTCCCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATc < 1:137707/243‑1 (MQ=255) tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATc > 2:137707/1‑243 (MQ=255) gagccggaaaaagggtttCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCGTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCAAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACACCTGGCGGTCATGACGATACGGAATATCGCTGCCCTCCAGTCCCTCCTGGATCACAATCCCCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCt < 2:123596/235‑1 (MQ=255) aGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGCGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAAc > 2:171959/1‑250 (MQ=255) gccgcATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTccc > 1:291488/1‑250 (MQ=255) cgcACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTcc > 1:205569/1‑249 (MQ=255) gcACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATcc < 2:275145/150‑1 (MQ=255) gcACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATcc > 1:275145/1‑150 (MQ=255) cACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGGAACCCCTTTTCCAGCGCGTTATGTAACAACGGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCGGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCt < 1:171959/251‑1 (MQ=255) ttttGTCTTCAATTGAAACCCGGATTTTTCCTTCGGGTTTACGTTAACCTAAAGCCTTTACCGCCTTTTCCCGCCCTTTATGTAACAACTGGCGGTCATGCCGATACGAAATATCGCTGCCCTCAAGTCCCTCCTGGATCACATCCCCCTCTTTCACCGCCGATACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCt < 2:227919/248‑1 (MQ=255) gTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTACCCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAAt < 1:21743/251‑1 (MQ=255) cTTCAATAGGAAGACGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCCCCATAATTGCCAGCTTGCTTTCCAGCTTCAAAtt > 2:253044/1‑250 (MQ=255) gCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTgg > 1:10462/1‑251 (MQ=255) aGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTAACTCATGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCACATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTgcggcg > 1:170077/1‑251 (MQ=255) aTGTAACACCGGGCGGCCATGACGATCCGGAATATCGCTGCCCTCCAGTACCTCCTGAATCACAATCCCCTCTTTCCCCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCt < 2:132395/251‑1 (MQ=255) aTGTAACAACTGGCGGTCATGACGATACGAAATATCGCTGCCCTCCAGTCCCTCCGGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCt < 1:80741/251‑1 (MQ=255) aaacaacTGGGGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAACCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTggg < 1:232971/250‑1 (MQ=255) tGGCGGTCATGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTc > 1:235816/1‑251 (MQ=255) aTGACGATACGGAATATCGCTGACCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACAGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcagc > 1:180359/1‑250 (MQ=255) aaTATCGCTGACCTCCAGTCCCTCCTGGATCCCAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCa < 1:91718/251‑1 (MQ=255) cGCTGACCTCAAGTACCTCCTGGATCACATTCTGCTCTTTCACCGCAGAGCCATCCACTTTTGGCCCGACGATGCCCGCATCAATGACATTTTTACCAAAATACTGATCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGACGCAGGTACACTCAACTCAAGCCCTAGATTGCCGATATAAACCATCGGTGCTGGCGTGCGGCGTAATGCCTGGGCGGTTACATTCAGCAACAGTATAGGCAtacgg > 2:351067/1‑247 (MQ=255) gCTGCCCTCCAGTCCCTCCTGTATCACAATCCGCTCTTCCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCTATTTCCTTCAGCAGCAGAATTTGCATCAGGc < 1:102354/251‑1 (MQ=255) | GGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTG‑TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGC > NC_000913/815577‑816061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |