Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,123,923 IS2 (–) +5 bp coding (530‑534/1026 nt) cytR ← DNA‑binding transcriptional repressor CytR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4123923 =0 (0.000)30 (0.820) 30/490 0.3 100% coding (534/1026 nt) cytR DNA‑binding transcriptional repressor CytR
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 41239270 (0.000)51 (1.390) 45/490 0.1 100% coding (530/1026 nt) cytR DNA‑binding transcriptional repressor CytR
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

CCGAGCGCCATCACATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGA  >  NC_000913/4123681‑4124163
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            
ccGAGCGCCATCACATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGGGACACCGCGGCATCTCTTCGGGACCGGCTATACAGCCCATCCGTTTTTGCCCTTTCTCATATAAATAATtggg                                                                                                                                                                                                                                          >  2:9427‑M1/1‑247 (MQ=255)
         aTCACATCGCTATGGCAGAGGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGAGGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCGCTTCTGGATCGGCGATACAGCCAATCCGTTTATGCCCTTTCTCAGATAAATGATtgtgtgtgcccct                                                                                                                                                                                                                                 <  2:344234‑M1/251‑14 (MQ=255)
           cacaTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGTGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctat                                                                                                                                                                                                                               <  1:171517‑M1/251‑16 (MQ=255)
            ataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATgc                                                                                                                                                                                                                              >  1:300656‑M1/231‑251 (MQ=255)
             caTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatat                                                                                                                                                                                                                             <  1:187258‑M1/251‑18 (MQ=255)
             caTCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGAAGCAGCTGCATAGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatat                                                                                                                                                                                                                             >  1:37357‑M1/1‑234 (MQ=255)
               gcgCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatattt                                                                                                                                                                                                                           <  2:91296‑M1/250‑20 (MQ=255)
                           ctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTc                                                                                                                                                                                                               <  1:160759‑M1/36‑1 (MQ=255)
                             acaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTc                                                                                                                                                                                                               >  2:47808‑M1/214‑249 (MQ=255)
                                  cagTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCCATACAGCCAATCCGGTTATGCCCTTGCTCATATAAATAAAtgggtttgcccctatatttccagacatctgttatcact                                                                                                                                                                                                        >  2:79740‑M1/1‑213 (MQ=255)
                                      aGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGAACGGCTATAAAGCCAATCCGGTTTTTCCCTTGCTCATATAAATAATtggattttcccctatatttcccgacatctgttatcactttac                                                                                                                                                                                                    >  2:275031‑M1/1‑209 (MQ=255)
                                       gccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGt                                                                                                                                                                                                   >  1:52362‑M1/204‑251 (MQ=255)
                                             tgtgGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                                                                                                              <  1:23970‑M1/250‑49 (MQ=255)
                                              aacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGcagc                                                                                                                                                                                            <  1:27690‑M1/55‑1 (MQ=255)
                                                 gagggagtccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGcagctcc                                                                                                                                                                                         >  1:362253‑M1/194‑251 (MQ=255)
                                                 gAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagc                                                                                                                                                                                         <  1:200523‑M1/251‑54 (MQ=255)
                                                    gATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacctctgttatcacttaacccattacaagcccg                                                                                                                                                                                      >  1:31084‑M1/1‑195 (MQ=255)
                                                       cAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctg                                                                                                                                                                                   <  1:138687‑M1/251‑60 (MQ=255)
                                                        aaGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc                                                                                                                                                                                  >  2:298359‑M1/1‑191 (MQ=255)
                                                         agcagcTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc                                                                                                                                                                                 >  1:221998‑M1/1‑190 (MQ=255)
                                                          cgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGt                                                                                                                                                                                >  1:20465‑M1/185‑251 (MQ=255)
                                                            agcTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                                                                                                               >  1:337618‑M1/1‑187 (MQ=255)
                                                            agcTGATGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACAAAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCCTATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaaacccgctgccgcc                                                                                                                                                                              >  2:366733‑M1/1‑187 (MQ=255)
                                                                 ctgcATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaaacccgcgcccgcagatat                                                                                                                                                                         >  2:42120‑M1/1‑182 (MQ=255)
                                                                 ctgcATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAACCAATCCGTTTATGCCCTTTCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattaaaagcccgctgccgcagatat                                                                                                                                                                         >  1:204620‑M1/1‑182 (MQ=255)
                                                                             gCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgccgatattcccgtggcg                                                                                                                                                               >  2:232520‑M1/1‑170 (MQ=255)
                                                                                 gctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCAt                                                                                                                                                         >  1:256518‑M1/162‑251 (MQ=255)
                                                                                    gCTTCGAACGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACACAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATTCAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatctccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                                                                                                                      <  1:244438‑M1/251‑89 (MQ=255)
                                                                                     aacaattgcgatcttttcctgtgtggtacgccgtctgcgtgtctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATcggc                                                                                                                                                     >  2:136596‑M1/158‑251 (MQ=255)
                                                                                       tCGAAGGTCAAGTCGCCACGGGTGATGTATTGCGGATCAACCATCATGCAGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGTACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggagttgcccctatatttccagacctccgttatcacttaacccattacaagcccgctgccgcatatattcccgtggcgagcgataaccc                                                                                                                                                    <  2:82651‑M1/250‑91 (MQ=255)
                                                                                          aaGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCTAATCCGTTTATGCCCTTGCTCCTATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaaacccgctgccgcagatattcccgtggcgagcgataacccagcc                                                                                                                                                >  2:263914‑M1/1‑157 (MQ=255)
                                                                                          aaGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcg                                                                                                                                                >  2:43530‑M1/1‑157 (MQ=255)
                                                                                                   tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGat                                                                                                                                                                                                            <  2:375121‑M1/39‑1 (MQ=255)
                                                                                                   tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGat                                                                                                                                                                                                            >  1:375121‑M1/144‑182 (MQ=255)
                                                                                                   tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCt                                                                                                                                        >  1:63393‑M1/144‑250 (MQ=255)
                                                                                                    cGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgg                                                                                                                                      >  2:1564‑M1/1‑147 (MQ=255)
                                                                                                    cGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGGGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcgctatgcg                                                                                                                                       <  2:37357‑M1/250‑104 (MQ=255)
                                                                                                     tcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGtt                                                                                                                                     <  1:229954‑M1/110‑1 (MQ=255)
                                                                                                     gCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga                                                                                                                                     <  1:298359‑M1/251‑106 (MQ=255)
                                                                                                         gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTc                                                                                                                                 >  1:320204‑M1/138‑251 (MQ=255)
                                                                                                          gggCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactattcggatgccc                                                                                                                                >  2:63235‑M1/1‑141 (MQ=255)
                                                                                                            gCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccatt                                                                                                                              <  1:231017‑M1/251‑113 (MQ=255)
                                                                                                            gCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccggggcgagcgattacccagcgcactattcggatgccatt                                                                                                                              >  2:64135‑M1/1‑139 (MQ=255)
                                                                                                            gCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCGTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactattcgtatgccatt                                                                                                                              <  2:314062‑M1/251‑113 (MQ=255)
                                                                                                             cGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc                                                                                                                             >  2:327951‑M1/1‑138 (MQ=255)
                                                                                                                    cgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCAt                                                                                                                      <  1:201979‑M1/125‑1 (MQ=255)
                                                                                                                        ggATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgct                                                                                                                  <  1:262015‑M1/251‑125 (MQ=255)
                                                                                                                        ggATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg                                                                                                                                                                                >  1:71353‑M1/1‑127 (MQ=255)
                                                                                                                        ggATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg                                                                                                                                                                                <  2:71353‑M1/189‑63 (MQ=255)
                                                                                                                                     ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGaa                                                                                                     >  1:182624‑M1/110‑251 (MQ=255)
                                                                                                                                       ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAAcc                                                                                                   <  1:294727‑M1/144‑1 (MQ=255)
                                                                                                                                         gCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggctgccattcgttataatgctcgaacgcctctgcaagg                                                                                                 >  2:147614‑M1/1‑110 (MQ=255)
                                                                                                                                          cAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggt                                                                                                <  2:362063‑M1/251‑143 (MQ=255)
                                                                                                                                               tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGcaac                                                                                            <  2:29296‑M1/151‑1 (MQ=255)
                                                                                                                                                 aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctgaagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACccagcaaaaac                                                                                         <  2:187303‑M1/154‑5 (MQ=255)
                                                                                                                                                          gAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgtt                                                                                  <  2:31084‑M1/249‑157 (MQ=255)
                                                                                                                                                           aaCATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccagtcgttataatgctcgaacgcctctgcaagtttctttgctgccgttaac                                                                               <  1:307292‑M1/251‑160 (MQ=255)
                                                                                                                                                             tccaatgactagtctcaaacctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCACATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCCGCTCCGGTGCCAATTCGTTCGCCCTCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAAtt                                                                             <  2:158896‑M1/166‑1 (MQ=255)
                                                                                                                                                              ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCaa                                                                               >  1:196544‑M1/85‑248 (MQ=255)
                                                                                                                                                                  tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATAAAACGGCAGCCTTGAAACCAGCAACAACATGCCATCAATTTGCtt                                                                        <  1:76398‑M1/171‑1 (MQ=255)
                                                                                                                                                                     tGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctgg                                                                       <  1:43530‑M1/249‑168 (MQ=255)
                                                                                                                                                                      tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAAAGCTGGCATCAAAAGGCAGCCTTGAACCCCGCAACAACATGCCCTCAATTTGCTTGGtg                                                                    <  1:224609‑M1/175‑1 (MQ=255)
                                                                                                                                                                       agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGtg                                                                    >  2:363615‑M1/76‑250 (MQ=255)
                                                                                                                                                                         ggCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttggg                                                                 <  1:9427‑M1/251‑174 (MQ=255)
                                                                                                                                                                            aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGtgatga                                                                >  2:210517‑M1/71‑249 (MQ=255)
                                                                                                                                                                                  tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCg                                                        <  1:86618‑M1/187‑1 (MQ=255)
                                                                                                                                                                                            actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGTCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGttt                                              >  1:324345‑M1/55‑251 (MQ=255)
                                                                                                                                                                                             aTCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcac                                             >  1:10312‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                  acttatttaagtgatattggttgtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGGGATGATCAAATCGATAAAGGTTTTTTCct                                        <  1:350437‑M1/203‑1 (MQ=255)
                                                                                                                                                                                                   tCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgcttt                                        >  1:294925‑M1/1‑52 (MQ=255)
                                                                                                                                                                                                   tCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcgttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctt                                         <  1:351983‑M1/249‑198 (MQ=255)
                                                                                                                                                                                                           ggCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttc                               >  1:211279‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                                        gtctggagattcagggggccagtctaATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTc                  >  2:302799‑M1/27‑251 (MQ=255)
                                                                                                                                                                                                                        aTCCGTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctg                  <  1:5561‑M1/251‑221 (MQ=255)
                                                                                                                                                                                                                            gTTTATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcccgctttatcgtgttcacgaagctctctgctat              <  1:85100‑M1/251‑225 (MQ=255)
                                                                                                                                                                                                                              agattcagggggacggtcgaATAAGTTACGGCATCAAATGCGGAGGTGAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGGTCCACAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCGGATTTTGATGCGCACAGTCGCCAAt            >  2:281053‑M1/21‑251 (MQ=255)
                                                                                                                                                                                                                               tATGCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacctattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattcc           >  1:242993‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                                  gCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgtt        <  2:294925‑M1/251‑231 (MQ=255)
                                                                                                                                                                                                                                  gCCCTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgtt        <  1:246883‑M1/251‑231 (MQ=255)
                                                                                                                                                                                                                                    ccTTGCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttac      >  1:338579‑M1/1‑19 (MQ=255)
                                                                                                                                                                                                                                        gCTCATATAAATAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctc  <  1:147614‑M1/251‑237 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            
CCGAGCGCCATCACATCGCTATGGCAGAAGACAGCAGTAGGCGGTTGTGGAAGATCAAGCAGCTGCTGCATCGCTTTGCTTCCGGCTTCGAAGGTGAAGTCGCCACGGGCGATGTATTGCGGATCAACCATAATGCCGCAGCGACGCAGCGCCTGAACATAGCCTTGCAGGCGGTAGTGACACAGCGGCATCTCTTCGGGACCGGCTATACAGCCAATCCGTTTATGCCCTTGCTCATATAAATAATTTACTGCATCAAATGCGGCGGTCAGATTGTCGATATGAACTGTAGGCAGCTCCAGCTCCGGTGCAAATTCGTTCGCCATCACCATCGGCGGCAGATTACGCTGTTCCTCAATGCTGGCATCAAACGGCAGCCTTGAACCCAGCAACAACATGCCATCAATTTGCTTGGTGATGATCAAATCGATAAAGGTTTTTTCCTGCTGATTTTGATGCGCACAGTCGCCAATCAGCACCAGA  >  NC_000913/4123681‑4124163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.