| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 407,365 | C→T | intergenic (+195/‑63) | yaiA → / → aroM | protein YaiA/protein AroM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 407,365 | 0 | C | T | 100.0% | 90.0 / NA | 25 | intergenic (+195/‑63) | yaiA/aroM | protein YaiA/protein AroM |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/13); total (12/13) | |||||||||||
CGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTCAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCAT > NC_000913/407136‑407600 | cGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACtt > 2:335686/1‑250 (MQ=255)cGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACtt < 1:335686/250‑1 (MQ=255) aaaCGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCgg < 1:358624/251‑1 (MQ=255) tGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACgaa > 2:411787/1‑248 (MQ=255) aaGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGc > 1:272638/1‑250 (MQ=255) tCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGtt < 1:113938/250‑1 (MQ=255) aaTTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTGACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGcc < 2:252199/251‑1 (MQ=255) ttCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACg < 1:411130/250‑1 (MQ=255) ataatTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATAc < 2:239833/251‑1 (MQ=255) taatTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTAGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATAc > 1:405690/1‑250 (MQ=255) aaTATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGAc > 1:117265/1‑236 (MQ=255) aaTATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGAc < 2:117265/236‑1 (MQ=255) tAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGat < 1:178312/250‑1 (MQ=255) aataacaatCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAgg > 1:291956/1‑148 (MQ=255) aataacaatCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAgg < 2:291956/148‑1 (MQ=255) ggAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGtt > 1:342277/1‑250 (MQ=255) aaTCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTa > 2:159314/1‑249 (MQ=255) aTTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTga > 1:26473/1‑248 (MQ=255) aTGCCGTGCACGTCTGCTGCTACGCTTGTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGt < 2:272638/251‑1 (MQ=255) ctACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGcc > 2:409600/1‑250 (MQ=255) gCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATc > 1:394328/1‑115 (MQ=255) gCTTTTTGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATc < 2:394328/115‑1 (MQ=255) ttttGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAATGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCATGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAATATAATATTTCCCATCATATCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCa < 1:51469/250‑1 (MQ=255) tttGTCATTTGTAGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAgg > 1:285375/1‑251 (MQ=255) aGCACAAGTAAGTGTTAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTTCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCGGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGCACGCGCCAGAAGCAGGCGAAGACACCAt < 2:382484/251‑1 (MQ=255) | CGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATCTTTACATTATGCCGTGCACGTCTGCTGCTACGCTTTTTGTCATTTGTAGCACAAGTAAGTGTCAGCAGTGGTGCTTCACACTTGCCCGGTAATTAACGACGAAAGAAAAGTAAGGTGGATGAACAATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCAT > NC_000913/407136‑407600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |