Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,287,464	Δ110 bp		[tyrT]	[tyrT]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1287464	1287573	110	65 [0]	[0] 65	[tyrT]	[tyrT]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1287463	0 (0.000)	65 (0.680)	46/586	0.9	100%	intergenic (‑135/+75)	tyrV/tyrT	tRNA‑Tyr/tRNA‑Tyr
	?	NC_000913	1287574 =	0 (0.000)					noncoding (49/85 nt)	tyrT	tRNA‑Tyr

GAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGA  >  NC_000913/1287165‑1287751                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                 gAAGCTTCTCATCCTTCCCCGCATGTGCAGAATATTGAATTGCGGATTCGTTGGTAAGTTCAGGGACTTTTGAAATTGATGGTGTTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAt                                                                                                                                                                                                                                                                                                 <  2:673161‑M1/300‑2 (MQ=255)   aGCTTCTCATCCTTCCCCGCACGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCATGGACTTTTGAAAGTGATGGTGGTGGTGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTGATGAGGGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCGCCTCACCCTTCGGGTCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtga                                                                                                                                                                                                                                                                                               <  2:723713‑M1/300‑4 (MQ=255)     cTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTACTTCAAATTTTGCGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGNTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacg                                                                                                                                                                                                                                                                                             >  2:583608‑M1/1‑295 (MQ=255)     cTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATACTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacg                                                                                                                                                                                                                                                                                             >  2:760987‑M1/1‑295 (MQ=255)      ttCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacgg                                                                                                                                                                                                                                                                                            >  1:608614‑M1/1‑294 (MQ=255)       tctcATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCACATTTTGAGGTACTGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGTCGTTGCCTGTGGCAACGTTCTCTAGCTCTCGTTCGAATTGAACTTTAGTAGAtgaagga                                                                                                                                                                                                                                                                                           >  2:111119‑M1/1‑293 (MQ=255)            tCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACATTCTCTCGCTTTCACTCGAATCGAACCTTAGTCGAtgacggcagatt                                                                                                                                                                                                                                                                                      >  2:51215‑M1/1‑288 (MQ=255)               ttCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaa                                                                                                                                                                                                                                                                                   >  1:703091‑M1/1‑285 (MQ=255)                              gAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCCGGGGTAATTCAACTTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGTCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACATTAGTCGAtgacggcagatttaacgtctgctccctttg                                                                                                                                                                                                                                                                    >  2:396930‑M1/1‑270 (MQ=255)                              gAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttg                                                                                                                                                                                                                                                                    >  1:355230‑M1/1‑270 (MQ=255)                                atatTTAATTGCGGATTCGTTGGGAAGTTCAGGTACTTTTGAAATTGATGGTGGTGGTGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggc                                                                                                                                                                                                                                                                  <  1:510647‑M1/300‑33 (MQ=255)                                atatTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggc                                                                                                                                                                                                                                                                  >  1:747098‑M1/1‑268 (MQ=255)                                atatTCAATTGCGGATTCGTTTGGAAGTTCAGGGACTTTTAAAATGGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTTAGGTAATGCTTGAGATGGTGGTGGGGTAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggc                                                                                                                                                                                                                                                                  <  2:383846‑M1/300‑33 (MQ=255)                                atatTCAATTGCGGATTCGTTGGTAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggc                                                                                                                                                                                                                                                                  <  1:392797‑M1/300‑33 (MQ=255)                                              aTTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGTGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaacccc                                                                                                                                                                                                                                                    <  2:165249‑M1/300‑47 (MQ=255)                                                  gTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccacca                                                                                                                                                                                                                                                >  1:154337‑M1/1‑250 (MQ=255)                                                   tttttaagttcaGAGACTTTTGAAAGTGATTGTGTTGGTGGAAGAATTTGAACCTTCGAAGTCGATTACGGCAGATTTACCTTCTTCCCCCTTTGGCCGCTCGGGAACCCCACCATGGGTAATTAAGATTTTGAGTTAGTGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCGCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctctggaaccccaccac                                                                                                                                                                                                                                               <  1:257232‑M1/295‑52 (MQ=255)                                                   ttGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGGTTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTTGCCGCTCGGGAACCCCACCAGGGGTAGTTCAAATTTTGAGGTAATGCTTGAGATGTTGGTGGGGTAAGGATTATTCGTCGTTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccac                                                                                                                                                                                                                                               <  2:468437‑M1/300‑52 (MQ=255)                                                        gaggtcaggGACGTTGGAAGTTGATGGTGTTGTGGGAAGGGTTCGAACCGGCGAAGTCGATGACGGCAGATCTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCNACCAGGGGTAATTCAAATTTTGAGGTAATGCTTTAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggt                                                                                                                                                                                                                                          <  2:706463‑M1/296‑57 (MQ=255)                                                          gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAGTGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTTCCTATGGCACCGTTCTCTCGATTTCGCTCGAATCGAACCTTAGTCGAtgaaggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggcag                                                                                                                                                                                                                                        >  2:728077‑M1/1‑242 (MQ=255)                                                          gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaa                                                                                                                                                                                                                                        >  1:145542‑M1/1‑242 (MQ=255)                                                          gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAACCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaa                                                                                                                                                                                                                                        >  2:463698‑M1/1‑242 (MQ=255)                                                             cAGGGACTTGGGAAAGTGATGGTGGTGGTGGAAGGATTCGAACCTTCGAAAGCGATGATGGCAGATTTACAGTCTGCTCCCTTTGGCCACTCGGGAACCCTACCAGGGGTGATTCAAATTTTGAGGTGATGCTTGGGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACTTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgc                                                                                                                                                                                                                                     <  2:764163‑M1/300‑62 (MQ=255)                                                             cAGGGACGTTTGAAAGTGATGGTGGTGGTTTAAGTATTCGAACCTTCTAATTCGATGACGGCAGATTTACATTCTGCTCCCCTCGTCCGCTCGTGAACCCCACCATGGGTAATTCAAATTTTTATTTAATGCTTTAGATGGTGGTGGGGGAAGGAGTATTCGTCGCTGCGCGCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgc                                                                                                                                                                                                                                     <  1:92793‑M1/300‑62 (MQ=255)                                                                         aaaGTGGTGGTGGTGGTTGAAGGATTCGAACCGTCGGGGTCGATGACGGCAGATCTACAGTCTGCTCCCTTTGGCCACTCGGGAACCCCACCATGGGTAGTTCAGGTTTTGAGGTAGTGCTTGAGATGGTGGTGGTGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTGCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTGAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcc                                                                                                                                                                                                                         <  2:429312‑M1/300‑74 (MQ=255)                                                                             tGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgct                                                                                                                                                                                                                     >  1:467996‑M1/1‑223 (MQ=255)                                                                                      tggGGTAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTTGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTGTGAGGTAATGCTTGAGATGGTGTTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcg                                                                                                                                                                                                            <  2:465725‑M1/300‑87 (MQ=255)                                                                                       ggggtAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTCCAGTCTGCTCCCTTTGGCAGATCGGGAACCCAACCAGGGGTAATTCAAGTTTGTAGGTGATGCTTTAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAGTCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgg                                                                                                                                                                                                           <  1:285596‑M1/300‑88 (MQ=255)                                                                                                               gTCGATGACGGCAGATTTACAGTCTACTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaat                                                                                                                                                                                   <  2:726485‑M1/300‑112 (MQ=255)                                                                                                                            gATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCACATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGCATCGAACCTTAGTCGAtgacagcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgagccgctgt                                                                                                                                                                      >  2:264626‑M1/1‑176 (MQ=255)                                                                                                                            gATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACNTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtagtgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgt                                                                                                                                                                      >  2:195825‑M1/1‑176 (MQ=255)                                                                                                                            gATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgt                                                                                                                                                                      >  1:166754‑M1/1‑176 (MQ=255)                                                                                                                                tACAGTCTGCTCCCTGTGGCCGCTCTGGAACCCCGCCAGTGGTAATTCCAATTTTGAGGTGATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTNCGCTCGAATCGAACCTTAGTCGAtganggcagatttaaagtctgctccctttggccgctcgggaaccccaccacgggttaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaag                                                                                                                                                                  <  2:535020‑M1/300‑129 (MQ=255)                                                                                                                                        gCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTTAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTAACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgt                                                                                                                                                          <  1:778008‑M1/300‑137 (MQ=255)                                                                                                                                           cccctcgaccgctcgggaACCCCACCAAGGGTAATTCAAATTTTGAGATAATGCTTGAGATGGTGGTAGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTAGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcaggaaccccaccacggggtaatgctttccactggcctgctcccctatcgggaagctgggcgcatcatatcaaatgacgcgccgctgtacaatatcacgctaa                                                                                                                                                       >  2:342274‑M1/9‑161 (MQ=255)                                                                                                                                           cccTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccaaggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttga                                                                                                                                                       >  2:437934‑M1/1‑161 (MQ=255)                                                                                                                                           cccTTTGGCCGCTCGGGAACCCCACCAGGGGNAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAANGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaacgaagcgcagctgtaaagtgttaagttga                                                                                                                                                       >  2:564017‑M1/1‑161 (MQ=255)                                                                                                                                                      cTCGGGAACCCCCCCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGAGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgttttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgcgaaaaatgaac                                                                                                                                            >  2:19715‑M1/1‑150 (MQ=255)                                                                                                                                                                caaccaggGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcggaaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttactttgagacaaatgaactggttgcgta                                                                                                                                  >  2:397833‑M1/3‑140 (MQ=255)                                                                                                                                                                                         ggTAATGCTTGAGATGGTGTTGGTGGAAGGATTATTCGTCGCTTCGCTCCTCACTCTTTGGGCCGTTGTCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatctggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaagg                                                                                                         <  2:272345‑M1/300‑186 (MQ=255)                                                                                                                                                                                                     gaTGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatt                                                                                             >  1:311579‑M1/1‑103 (MQ=255)                                                                                                                                                                                                         gtggtggGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttg                                                                                         >  1:442458‑M1/1‑99 (MQ=255)                                                                                                                                                                                                                gggAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcga                                                                                  >  1:799960‑M1/1‑92 (MQ=255)                                                                                                                                                                                                                     ggATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcnggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcntcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaatttacatccgtaacggattaaaggtaaacagttatttttgctggcgattaaa                                                                             >  2:633657‑M1/1‑87 (MQ=255)                                                                                                                                                                                                                                    tcgctCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgat                                                              >  1:442158‑M1/1‑72 (MQ=255)                                                                                                                                                                                                                                    tcgctCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaaaggattaaaggtaaacagttatttttgctggcgattaaagaataatcgttcgat                                                              >  1:339562‑M1/1‑72 (MQ=255)                                                                                                                                                                                                                                      gctCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtcattttcatccgtcacggattaacggtcaccagttatttttgatggcgattaaagaataatcgttcgatta                                                            >  2:679826‑M1/1‑70 (MQ=255)                                                                                                                                                                                                                                         cctcACCCTTCGGGCCGTTGCCTGTGGCAACNTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtantgctttttactggcctgctcccttatcgggaagaggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccg                                                         >  2:575673‑M1/1‑67 (MQ=255)                                                                                                                                                                                                                                         cctcACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggcagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccg                                                         >  2:140126‑M1/1‑67 (MQ=255)                                                                                                                                                                                                                                              cccTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaac                                                    >  1:50093‑M1/1‑62 (MQ=255)                                                                                                                                                                                                                                                cTTCGGGCCGTTGCCTGTGGCAACGTTCTCTNGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttntactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaa                                                  >  2:563596‑M1/1‑60 (MQ=255)                                                                                                                                                                                                                                                            gCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactgtcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtg                                      >  1:377280‑M1/1‑48 (MQ=255)                                                                                                                                                                                                                                                             ccTGTGGCAACGTTCTCTCGCTGGCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgc                                     <  1:443023‑M1/300‑254 (MQ=255)                                                                                                                                                                                                                                                                   gCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtac                               <  1:1853‑M1/300‑260 (MQ=255)                                                                                                                                                                                                                                                                   gCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttacnggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtac                               <  1:576191‑M1/300‑260 (MQ=255)                                                                                                                                                                                                                                                                       cGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttg                           >  1:319286‑M1/1‑37 (MQ=255)                                                                                                                                                                                                                                                                          tctctcGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttgtat                        <  1:649684‑M1/300‑267 (MQ=255)                                                                                                                                                                                                                                                                          tctctcGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttgtat                        <  2:109934‑M1/300‑267 (MQ=255)                                                                                                                                                                                                                                                                            ttttgtgtgagcgcgcagaacacctgagtcgaggacggcagagttaaagtctgctccctttggccgctctggaaccccaccaaggggtaatgctttttactggcctgctccctnatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaanatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttgtatag                      <  2:626819‑M1/279‑269 (MQ=255)                                                                                                                                                                                                                                                                            tctcGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactgtcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttgtatag                      <  2:373250‑M1/300‑269 (MQ=255)                                                                                                                                                                                                                                                                            tctcGCTTTCGCTCGAATCGAACCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctnccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttgtatag                      <  1:544149‑M1/300‑269 (MQ=255)                                                                                                                                                                                                                                                                                    tCGCTCGAATCGAACCTTAGTCAAtgacggcagatttaaattctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttgtatagtgcacgac              <  1:595390‑M1/300‑277 (MQ=255)                                                                                                                                                                                                                                                                                           aatcggaCCTTAGTCGAtgacggcagatttaaagtctgctccctttggccactcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattatcgtaaacaaagacgcgctgtgccagtactttgtatagtgcacgacttaagac       <  2:50316‑M1/300‑284 (MQ=255)                                                                                                                                                                                                                                                                                           aatcgaaCCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgtgctgtgccagtactttgtatagtgcacgacttaagac       >  2:252219‑M1/1‑17 (MQ=255)                                                                                                                                                                                                                                                                                                aaCCTTAGTCGAtgacggcagatttaaagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgttacgttgagaaaaatgaactggttgcgtaattttcatccgtaacggattaaaggtaaccagttatttttgctggcgattaaagaataatcgttcgattaccgtaaacaaagacgcgctgtgccagtactttgtatagtgcacgacttaagacgtttt  >  2:684159‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                 GAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGAGATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCAACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGCCGCTGTAAAGTGTTACGTTGAGAAAAATGAACTGGTTGCGTAATTTTCATCCGTAACGGA  >  NC_000913/1287165‑1287751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑