New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	54 (0.520)	5 (0.060)	5/446	7.3	9.9%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	781653 =	51 (0.660)					intergenic (+1/‑432)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGG  >  NC_000913/780927‑781507                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                  ggtggaagcggtagtaaaacGTGAAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGt                                                                                                                                                                                                                                                                                                 >  1:815078/20‑300 (MQ=14) aTCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTANTATCCAGCGCAGTATCGGGTGATTAGNTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCATGCACGACccaccaatgt                                                                                                                                                                                                                                                                                               >  2:566181/1‑296 (MQ=255)         cAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTCCTGACGGTGGGTTCGGTGGAAGTATTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGACAGC‑AACTCCCTTACACGGGGGGGGTCGGCTGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTC‑CGTTGGTAGAGCAGTTGACTTTTAATCACTTGGTCGCCGGTTCGAATCCTGCACGACTCACCAGTTTTAACATCa                                                                                                                                                                                                                                                                                       >  2:218935/1‑300 (MQ=38)           gATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCa‑aa                                                                                                                                                                                                                                                                                    >  1:528020/1‑300 (MQ=255)             tGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACt                                                                                                                                                                                                                                                                                  >  1:439889/1‑300 (MQ=255)             tGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACt                                                                                                                                                                                                                                                                                  >  1:416868/1‑300 (MQ=255)                     gtgtAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTCATAAAGGTGGGCCCAGGGGAAGTAGCTTGCAGTACCCAACACCATATAGAGTGATCAACGCAGCTAGGAGAGCCACC‑CCCTTACAAGGAGGGAGTCGGCGGTTCGACCCCATCATCACCCACCACCCAGGTCGTTAACTCCAGT‑GGTAGAGCAGTCGACTTTTACTCGAGTAATCGCAGGTTCGACTCCTGCACGACCCACCAGCTTTAACACCA‑AACTccactgtt                                                                                                                                                                                                                                                                          >  1:390787/1‑293 (MQ=255)                          ggATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGGCGGCTGGTTCGGTGGGAGTAGTTTGTAGCATCCATCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTACATTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCGGATGTTAAGCg                                                                                                                                                                                                                                                                     >  1:267618/1‑300 (MQ=21)                                       tcggcaacgttccGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAACGACTTTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCTGGGGATGGGCTTAGATGGTAGAGC‑GCTGCCCCTACGAGGCTGTGTTTGTAGGTTCGGCTTAGTAGTCACTTATAAATATGGGCATTAGCTA‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                        <  2:367677/289‑1 (MQ=9)                                         aGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                        <  2:796489/300‑1 (MQ=255)                                                 cccGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTACTGAAAATGGGTTTGGTGGAAGTCGTTTGTCGTCTCCAGCGCCGTATCGGGTGACTATTTCAGCTGGGGGAGC‑AACTCCCTTAAAAGGAGGGGGTCGGCTGTTTGCCCCCGTCATCAACCCCTCCCCGGGTCGTTAGCTC‑AGTTGGTAGAGTAGTTGGCTTTTAATCAATTGGTCGCAGGTTCGAATTCTGCATGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGGAGGGTAACGGTGCGCCAGCa                                                                                                                                                                                                                                              >  1:175378/1‑300 (MQ=255)                                                            ag‑cgaag‑cgaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAg                                                                                                                                                                                                                                   <  2:518131/300‑1 (MQ=255)                                                                      gaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTCAACATCA‑ACCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAACAACGGCCAGCAGGgcgag‑cg                                                                                                                                                                                                                          >  1:746203/1‑300 (MQ=255)                                                                                     aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCNTCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCNCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTg                                                                                                                                                                                                          >  2:646440/1‑300 (MQ=255)                                                                                     aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGCCCCACCAGTTTTAAAATCA‑CAATCAGGTGTTAAGCGTGAGGGGTAAAGTTGCGCAAGCACAGGCCAGTAGGGCGAG‑CGAAG‑TGAGGCATcccg                                                                                                                                                                                                          >  1:93234/1‑298 (MQ=17)                                                                                     aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTg                                                                                                                                                                                                          >  1:631490/1‑300 (MQ=255)                                                                                          ccacTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACCTCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGa                                                                                                                                                                                                     >  2:799768/1‑300 (MQ=255)                                                                                            acTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAcc                                                                                                                                                                                                   >  1:487866/1‑300 (MQ=255)                                                                                                     ggTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCNCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGGTACT‑GGTAGAGAA‑CGTGAAGGATAACGTTGCGNTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACccaccatcc                                                                                                                                                                                           <  2:767738/300‑4 (MQ=14)                                                                                                          gTTCGGTGGAAGGGGGGTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCGGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGACGGTTCGATCCCGTTATCACCCACTACTCGGGTCGTTAGCTC‑AGTGGTTAGAGCAGGTGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCGGTTTTAACAGCA‑AACTCAGATGTGAAGCGTGAAGGAGAACGTGGCGCAAGCAACGGCCCGTAGGGCGAG‑CGAAG‑TGGGTCATCCTGCACGACCCACCAATCTaaaaa                                                                                                                                                                                     <  1:659665/300‑2 (MQ=14)                                                                                                                  gAAGTAGTTTGTAGTAGCCAGCGCAGTATCGGTTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAATGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTGAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGccc                                                                                                                                                                             <  1:277414/300‑1 (MQ=255)                                                                                                                       agtTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGt                                                                                                                                                                        >  1:487277/1‑300 (MQ=255)                                                                                                                            gtagtaTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTCCACACCCCAACAATCTTCACGATTGGCACAGAGT‑aaaaa                                                                                                                                                                  >  2:528474/1‑300 (MQ=14)                                                                                                                            gtagtaTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATAA‑AATTCGGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGATAG‑CGAAG‑CGAGTCATCCTGCACGAGCCACCAATCTTCAAGATTGGCCCCGAGT‑aaaaa                                                                                                                                                                  >  2:424363/1‑300 (MQ=17)                                                                                                                                      gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGCTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACAGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAAGAACCACCAATCTTAAAGGTTGGACCCGGGT‑AAAAATccgtaaggt                                                                                                                                                        >  2:356537/1‑292 (MQ=17)                                                                                                                                      gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACACCA‑AACTCAGATGTTAAGCGTGAAGGCTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCGTCCTGCACGACCCACCAATCTTAAAGATTGGCCACGAGT‑AGAAATCTTTCCGGt                                                                                                                                                        >  2:145569/1‑300 (MQ=255)                                                                                                                                          aGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGCACCACCCATCTCAACATCA‑AACTAGGCCGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTCGGGCGAG‑CGAAG‑CGAGCCATCCTGCACGACCCACCAATCTTAAAGATTGGACACGAGT‑AAAAATCTTTAAGGTAaca                                                                                                                                                    >  2:426091/1‑300 (MQ=17)                                                                                                                                           gTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAacac                                                                                                                                                   >  1:127982/1‑300 (MQ=255)                                                                                                                                           gTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTACCTTACAAGGAGAGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAACGTGGAGGGTAAAGTTACGCCAGCAAAGGCCCGCAGGGCGAT‑AGCAG‑CGCGTCACCCTGCACGAACCCCAAATCTTAGAGATTGGCAACGAGT‑AAAAATCCTGAAGGTAacac                                                                                                                                                   >  1:345625/1‑300 (MQ=14)                                                                                                                                                 gtataagagacaggCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCTGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTNCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTGAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTAt                                                                                                                                             <  2:190605/287‑1 (MQ=255)                                                                                                                                                    gcttAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                         >  1:622845/3‑300 (MQ=255)                                                                                                                                                      ttAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCNGTTTTAACATCA‑AACTCAGATGTTAANCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                        <  2:557025/300‑1 (MQ=255)                                                                                                                                                         gCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAACCACCAATATTAAAGATTGGAACCGAGT‑AAGCATCTTTCAGGTATCACCCGTCTGGGTCGtt                                                                                                                                     >  1:479588/1‑300 (MQ=17)                                                                                                                                                            cAGCTGGGAGAGC‑ACCTCCCTTGCAAGGAGGGGGTCGGCGGGTTGATCCCGTCAGCACCCAACACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                  <  2:803622/300‑1 (MQ=255)                                                                                                                                                             aGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAACCACCAATCTTAAAGGTTGGCACCGAGT‑AAAAATCTTTCGGGTAACACCCGTCTGGGTCGTTAGCt                                                                                                                                 >  1:223779/1‑300 (MQ=255)                                                                                                                                                              gCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGACCAGAGG‑AAAAATCTTGCAGGTAAAACACGTACGGGtagctaactc                                                                                                                                >  2:397450/1‑291 (MQ=17)                                                                                                                                                              gCTGGGAGAGC‑ACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTGAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGT‑AAAAATCTTTCAGGTAACACCCGTAtctgtctcttatac                                                                                                                                >  1:191534/1‑287 (MQ=255)                                                                                                                                                                       ac‑ACCTCCCTTACAAGGAGGGGGTTTGCGGTTCGGGTCCGTCAGCAACCAACACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTag                                                                                                                       <  1:615786/299‑1 (MQ=21)                                                                                                                                                                           ccTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                    <  1:670114/300‑1 (MQ=255)                                                                                                                                                                           ccTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAACATCA‑ACCCCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCACGTAGGGCGAG‑CGTAA‑CGAGTCATCCTGCACGAACCCCCAATTTTAAGGATCGGCATAGAGT‑AGAGATTTTTCAGGTAACCCCCGCGCGGGTATTTAGGTAAGTTGGTAGAGc                                                                                                                    >  2:512736/1‑300 (MQ=14)                                                                                                                                                                                 ttACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTAATCCTGCACGACCCACCAATCTTAGAGATTGGACCCGAGT‑AAGAATCCTTCAGGTAACACCCGTCTGGGTCGTTAGTTTAGTTGGTAGAGCAGTTGa                                                                                                              >  1:764650/1‑300 (MQ=18)                                                                                                                                                                                   aCAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCCTAAAGATTGGCCCCGAGC‑AAAAATCTTTCATGTAACACCCGTATGGGTCGTTAGCTCAGCTGGTAGAGCAGTTGACt                                                                                                            >  1:464564/1‑300 (MQ=255)                                                                                                                                                                                        gaggGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACNTCC‑AACTCAGATGTTAAGCGTGAAGGNTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCCTCCTGCACGAACCACCAATCTTAAAGATTGGCCCCGAGT‑AAACCTCTTTCCGGTCACACCCGTATGGGTATTTAGCTCCGTTGGTAGAGCAGTTGACTTTTaa                                                                                                       >  2:547959/1‑300 (MQ=18)                                                                                                                                                                                          gggggTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGTAANGGCCCGTAGGGCGAG‑CGAAG‑CGAGTTATCCTGCACGACCCACCAATCTCAAAGATTGGCCCCGAGT‑AAAACTTTTTAAGGTAAAACCCGTATGGGTCGCTAGCTCAGCTGGTAGGGCatcttactcttcatc                                                                                                     >  2:198592/1‑286 (MQ=17)                                                                                                                                                                                                                     acccaccACTCTGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGAATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGATT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                          <  1:439444/300‑1 (MQ=255)                                                                                                                                                                                                                           ccaccGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑CATTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTCTTAAAGATTGGCCCAGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTAGTTAGCTCAGTTGGTAGAGCAGTCGACTTTTAATCAATTGGTAGCCGGTTAGAATCTTGCACGACcca                                                                    >  2:116524/5‑300 (MQ=21)                                                                                                                                                                                                                               cGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                <  1:818642/300‑1 (MQ=255)                                                                                                                                                                                                                                       tatcTC‑AGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAGCNGGAATGACCCACCAGTTTTAACAGCA‑AACTCAGATGTTAAGCGTGAAGGATAACGCTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAAGACCAACCAACCTTAAAGATTGGCTCCGAGT‑GAGAACCTTTCAGGTAACACACGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                        <  2:611232/297‑1 (MQ=25)                                                                                                                                                                                                                                       tAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                        <  1:116922/300‑1 (MQ=255)                                                                                                                                                                                                                                               gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCCCGAACCACCAATTTAAAGGTGGTTAc                                                 >  2:639106/1‑300 (MQ=255)                                                                                                                                                                                                                                                                   gtAATCAATTAGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGGTAAGCGTGAAGGATAACGTTTCTCCAGCAACGGCCCGTAGTGCTAG‑CGAAT‑CGAGTCATCCTGCACGACCCAACGCTATTGAAGATCGGACCTGATT‑AAAAATCTTTCAAGTAACCCCCTTCTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGTTAGAGAACGTGAAGGAt                             <  1:650539/299‑1 (MQ=25)                                                                                                                                                                                                                                                                        cAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                        <  1:388616/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                      ttCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGCACCACCAATCTTCAAGATTGGCACCGAGT‑AAAAATCTTTCTGTTAACACCCGTCCGGGTCTTTAGCTCAGTTGGTAGAGCAGTTGATTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAAAAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACgg          >  2:164851/1‑300 (MQ=37)                                                                                                                                                                                                                                                                                              cTGCACGACCCACCATTTTTACCATCA‑AACTCATATTTTAAGCGTTAAGGATAACGCTGCACCAGCAACGCCCCTTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCNCCGGCCTTGATGGTGGGCTCCGAGGGAGGGATGATAGAT‑TAACACACTGACGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAgg  <  1:579087/300‑1 (MQ=16)                                                                                                                                                                                                                                                                                              cTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTNACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAgg  >  1:579694/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                  ATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGC‑ACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTC‑AGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCA‑AACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGT‑AAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGG  >  NC_000913/780927‑781507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.