New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 78132260 (0.500)6 (0.060) 6/520 8.9 7.1% intergenic (+100/‑47) lysY/lysZ tRNA‑Lys/tRNA‑Lys
?NC_000913 781811 = 104 (0.990)intergenic (+159/‑274) lysQ/nadA tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTT  >  NC_000913/781028‑781611
                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                  
gggTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTaa                                                                                                                                                                                                                                                                                               >  1:92776/1‑300 (MQ=255)
gggTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAtgtaaa                                                                                                                                                                                                                                                                                               >  1:542839/1‑295 (MQ=255)
  gTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAAATCAACCTCAGATGTTAAGCGTGAAGGACCACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAg                                                                                                                                                                                                                                                                                             >  1:320069/1‑300 (MQ=255)
          gAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCACACTCAGATGTTAAGCGTGAGGGATAAAGTTGCGCAAGCAACGGCCGGNAGGGCGAGCGAAGCGAGTCATCCCGTACAAACCACCAATCCTAAAGAGTggaaa                                                                                                                                                                                                                                                                                     >  2:696653/1‑297 (MQ=14)
               agtTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAtgtaaaaaagcgccctaaagg                                                                                                                                                                                                                                                                                <  2:534252/300‑21 (MQ=255)
                         aTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAACCTCAGATGTTAAGCGTGAAGGATAACGTTACGCAAGCACCGGCCCGTAGGGCGAGCGAAGCGCGTTCCCCTGTACGACCCACCCATCTTaaggggtggtaaagtgtagccacagcc                                                                                                                                                                                                                                                                      >  2:911874/1‑275 (MQ=14)
                         aTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAACCTCAGATGTTAAGCGTAAAGAACAACGTTTCACCAGCAAAGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGGGTGGCCACGAGGAAAAATCttg                                                                                                                                                                                                                                                                      >  2:345100/1‑299 (MQ=14)
                              gcgtaGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCCGTTTTACCCTCCCCCTCAGATGTTACGCGTGAAGGATACCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACTCCCCACCAATCTTCACGGTTGGTCCCGGGTAAAAATCTTTTAGGtc                                                                                                                                                                                                                                                                >  2:204690/5‑299 (MQ=11)
                              gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATTCACCTCAGATGTTAAGCGTGACTGATCGCGGTGCGCAAAAGATGGCCCGTGAGGCGAGCGAAGTGCGTCATCCTGCACGACCCACAAATCTCAAAGCTTGGCAACGAGTAAAAATCtctaaggt                                                                                                                                                                                                                                                                 >  1:114959/1‑293 (MQ=14)
                                   gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTCCTTGTTACGGGTCACGTTGCGCCAGCACCGGCCCGTAGGGCGAGCGAAGCGCGTCATCCTGCACGAACCACCAATCTTCAAGGTTGGAACCGAGTAGAAATCTTTCAGGTAccac                                                                                                                                                                                                                                                            >  1:399388/1‑300 (MQ=14)
                                   gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTAAAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGCTGGTAGAGTAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACCCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCCCGACCCACCAATCTTAAAGATTGGCACAGAGTAAAAATCTTCCAGGTAacac                                                                                                                                                                                                                                                            >  2:135069/1‑300 (MQ=17)
                                        ggttGATTAGCTCAGCTTGGAGAGCACCTCCCTTACAAGGATGGGGTCGGCGGTTCGACCCCTTCATCACCCACCACTCTGGTCGTTAGCTCAGTTGGTAGAGCAGTCGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTa                                                                                                                                                                                                                                                       <  2:576601/297‑1 (MQ=255)
                                           tGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATgg                                                                                                                                                                                                                                                    <  1:461967/300‑1 (MQ=255)
                                           ggATTAGCTCAGCTGGTAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCAATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATgg                                                                                                                                                                                                                                                    <  1:248857/299‑1 (MQ=255)
                                             aTTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                                                                                                                  <  1:432623/300‑1 (MQ=255)
                                               tagcttcgctgggaaaacaccctccctaaaaGGAGGGGGTTGGCGGTTCGATCCCTTCACCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCCTTCAGGTAACACCCGTATGGGT‑Cg                                                                                                                                                                                                                                               <  1:136403/271‑1 (MQ=18)
                                                      gcctggatagcactccccTTACAAGTGGGGGGTTGGCGGTTCGATCCCGTCATCACCCACCACTCTGGTCGTGAGCTCAGTTGGTAGGGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTACACGACTCACCAGCTTTAACATCAAATGTAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAAATTGGCCCCGAGTAAAAATCCTTCAGGTAACACCCGTATGGGT‑CGTTAGCTc                                                                                                                                                                                                                                        <  1:330760/285‑1 (MQ=18)
                                                      gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGACCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAACCAACAATCTTAAAGAGTGGAACCGAGTAAACATTTTTCGGGTaatgcctgtctgggttggtggttt                                                                                                                                                                                                                                         >  1:858139/1‑278 (MQ=14)
                                                      gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCCCCAATCTTAAAGATTGGCACAGAGTAAAAATCTTTAAGGTAACACCCGTATGGGT‑CGTTAGCTc                                                                                                                                                                                                                                        >  1:412348/1‑300 (MQ=255)
                                                           gagaGCACCTCCCTTACAAGTAGTTGTTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTg                                                                                                                                                                                                                                   <  1:612049/300‑1 (MQ=255)
                                                             gagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCCAACTCAGATGTTCCTCGTGAAGGATCACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGCGTCATCCTGCACAACCCACCAATCTCAAAGACCGGAAAAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGt                                                                                                                                                                                                                                 >  1:723394/1‑300 (MQ=17)
                                                                  ccTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGc                                                                                                                                                                                                                            <  2:897908/300‑1 (MQ=255)
                                                                     cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                                                                                                                         >  1:771126/1‑300 (MQ=255)
                                                                                 gggggTCGGCGATTCGATCCCCTCATCACCCACCCCTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                                                                                                                             <  2:203253/300‑1 (MQ=255)
                                                                                                       ctattacccaccACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTTAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                                                                                                                       <  1:355919/295‑1 (MQ=255)
                                                                                                           caccaaccAC‑CGGGTCGGTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACACAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCCTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCAc                                                                                                                                                                                  <  2:850558/300‑1 (MQ=255)
                                                                                                              ccaccaC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                                                                                                                               <  1:205986/300‑1 (MQ=255)
                                                                                                                      atgtgtataatagacagtGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGTGCGAGCGAAGCGAGGCATCCGGCACGACCCACCAAGCTTAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                                                                                                                        <  2:463682/283‑1 (MQ=25)
                                                                                                                                    aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTCCGCGTGAAGGGTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTCAAAAATTGACCCCGAGTAGACCTTTTTCCAGTAACACCTGTCTGGTT‑CGTTATCTCAGCTGGTAGAGCGGTTGACTTTTCCTTAGTTGGTTGACTGTTCGAATCCTGCACGAACAACCACTTCAAAGGTGGTTa                                                                                                                                                          >  2:592161/1‑300 (MQ=12)
                                                                                                                                     tttagTAGAGCAGTTGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCGGCACGACCCATCAGTTGTAACAGCAGACGCAGACGTTAAGCGTTAAGGATAACATTGCGCCAGCAACGGCCCTTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAACCTTAAAGATTGGCCCCGAGGAGAAAGCTTTCATGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTAc                                                                                                                                                         <  2:466984/296‑1 (MQ=25)
                                                                                                                                       tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCCAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaactgtctattatacacat                                                                                                                                                       >  1:469674/1‑283 (MQ=255)
                                                                                                                                               cAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGAGAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                                                                                                               <  1:425004/300‑1 (MQ=255)
                                                                                                                                               cAGTTGACTTGTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGCTTTAACATCAAATTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCTTGCACGACCCACCAATCTTAAAGATTGGCCCCGATTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                                                                                                               <  1:426192/300‑1 (MQ=255)
                                                                                                                                                      cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAg                                                                                                                                        <  2:611779/300‑1 (MQ=255)
                                                                                                                                                                  tGGTCGCAGGTTCGAATCCGGCACGACCCACCAGTTTTAACATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCg                                                                                                                            <  1:526399/300‑1 (MQ=255)
                                                                                                                                                                        cAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCTTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCTATTAAAAATCCTTCATTTAACACCCGTATGGGT‑CGTTAGCTCAGTTCTGAAAGCAGTCGACGGTTAATAAATGGGTAGAAGGTGCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCa                                                                                                                      <  1:348394/300‑1 (MQ=25)
                                                                                                                                                                                   ccTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCCTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGTT‑CGTGAGCTCAGTTGGGAGAGCAGGTGACTGTTAGTCACTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAg                                                                                                           <  1:525229/300‑1 (MQ=38)
                                                                                                                                                                                    cTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGNTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAgg                                                                                                          >  2:219702/1‑300 (MQ=255)
                                                                                                                                                                                           aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAACATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACAAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc                                                                                                   >  1:717697/1‑300 (MQ=255)
                                                                                                                                                                                           aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGTTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTAGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGAc                                                                                                   >  1:201835/1‑300 (MQ=255)
                                                                                                                                                                                           aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCCATTTAAAGATGGGTACTGGTAGAGAACGTGGAGGATAAGGTTGTGTTAGCAATGGCAAGAAGGGCGAGAc                                                                                                   >  1:840742/1‑300 (MQ=38)
                                                                                                                                                                                           aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGAc                                                                                                   >  1:774648/1‑300 (MQ=255)
                                                                                                                                                                                                ccattgttAACATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGACCGTAGTGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCGTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACTAAGTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGt                                                                                              <  2:740504/294‑1 (MQ=38)
                                                                                                                                                                                                ccaGTTTTAACATCAAACTCAGATTTTAAGCGTTAAGGATAACGTCGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTNAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGt                                                                                              <  2:820541/300‑1 (MQ=255)
                                                                                                                                                                                                ccaGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGt                                                                                              <  1:854536/300‑1 (MQ=255)
                                                                                                                                                                                                     tttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAACCTTAAAGATTGGCAACGAGTAGAAATCTTTAAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTCTTGGTAGAGAACGTGAAGGATAGCGTTGCGTTAGCAACGGCCCGAAGGGCGAGATGAAGTCGAGt                                                                                         >  2:335923/1‑300 (MQ=38)
                                                                                                                                                                                                           aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCt                                                                                   >  2:134319/1‑300 (MQ=255)
                                                                                                                                                                                                               aaCTCAGATTTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTATGTCGAGCGAAGCAATTCCCCCTACACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAAGTATTCAGTCAACGACC‑TTGGGGTGCGTGAGCGCAATCGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                               <  1:86579/300‑1 (MQ=21)
                                                                                                                                                                                                               aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGATTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCATCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCAc                                                                               <  1:135686/300‑1 (MQ=255)
                                                                                                                                                                                                                         ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAACCTTTCAGGTAACACCCGTATTGGT‑CGTTAGTTCAGGTGGTAGAGCAGTTGACTTTTAATTGATTGGTCACAGGTTCGAATCCTGCACGACCCGCCAAGTTAAAGTTGGTGACTGGTAGAGAACGTGAAGGATAACGGTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAt                                                                     <  1:533623/300‑1 (MQ=37)
                                                                                                                                                                                                                                tGAAGGATAACGTTGCGCCAGCAACGACCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAACCTTAAAGATTGGCCCCGAGGAAAAGTCTTTCAGTTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAAt                                                              <  1:851939/300‑1 (MQ=255)
                                                                                                                                                                                                                                 gAAGGATAACGTTGCACCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTGACTGGGAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATg                                                             <  1:11762/300‑1 (MQ=255)
                                                                                                                                                                                                                                                   aGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATACTGAATGATTAAGGCAGCATAATcc                                           <  1:221102/300‑1 (MQ=255)
                                                                                                                                                                                                                                                        ctgccctgaGGGCGAGCGAATCGAGGCATCCTGCACGACCCACCAATCGTAAAGAGTGGCCCCGAGTAAAAATCTCTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCaa                                      <  1:790374/292‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cgagcgaAGCGAGTCACTCGGCACGACCCACCAATCTTAAAGATTGGTCCCGAGTAAAAATCTTTCATTTAACACCCGTATGGGT‑CGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGTTCACAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGc                          <  1:226455/300‑1 (MQ=37)
                                                                                                                                                                                                                                                                                gTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCNATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTaga              <  1:674483/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCa           >  2:605686/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                   aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAAGAAGTCGAGTCTTCTTGAATGACCAACCATCTTGAAGGGGGCGGGCAGCATACTCCCTCACGGGGTCATTAGCTCAGTTTGTagggta           >  1:520599/1‑296 (MQ=25)
                                                                                                                                                                                                                                                                                   aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTGGAGTCATCCTGCACGACCCACCATCCTNAATGAGTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCCCAGGTGGTAGAGCa           >  2:700794/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                      cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGtt        >  1:519854/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                      cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAAGGGTCGTTAGCTCAGTTGGTAGAGCAGtt        >  2:377813/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                            gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGTT‑CGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCTAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACttt  <  1:479745/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                  
GGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGT‑CGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTT  >  NC_000913/781028‑781611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.