Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,930,718 | 0 | T | G | 30.8% | 179.9 / 16.4 | 79 | T126P (ACC→CCC) | ravA | regulatory ATPase RavA |
Reads supporting (aligned to +/- strand): ref base T (9/45); new base G (24/0); total (34/45) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.88e-13 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
ACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCGGGCCA > NC_000913/3930474‑3930959 | aCCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAg < 1:403439/251‑1 (MQ=255) aaGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGGAAGGAATT‑AAGAAtttc > 1:229517/1‑249 (MQ=255) aaGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGc < 1:541720/251‑1 (MQ=255) cATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCggg > 1:174102/1‑251 (MQ=255) aTCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGc < 2:526619/251‑1 (MQ=255) aTCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑TAGAATTGCCGGGc > 1:5128/1‑251 (MQ=255) aaCCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGGGCAAGGGTTT‑AAAAAGTGACGGGCCCGcct > 2:167593/1‑249 (MQ=255) aaCCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCtt < 2:231920/251‑1 (MQ=255) gTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGAtct < 2:252396/251‑1 (MQ=255) tttCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAAGATTGCCggggcctgttttcaggtatcatcc > 2:264902/1‑230 (MQ=255) tCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCa < 1:167593/250‑1 (MQ=255) cATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAg < 1:190547/250‑1 (MQ=255) gTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACa < 2:579967/251‑1 (MQ=255) gACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAAtt < 1:455016/251‑1 (MQ=255) gTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑TAGAATTGCCGGGGCCGCGTTTCAGATCTCCTCCACAAAGACAATTTCTGc > 2:619406/1‑251 (MQ=255) ggAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTTCCGGGGCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGc > 1:93813/1‑250 (MQ=255) gCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGt < 1:138064/251‑1 (MQ=255) ggAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAGAACTCATTCAGAAAGACAATTTCTGCTTCCCGCAGGTa > 1:213916/1‑250 (MQ=255) gAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCCGCTCGTTGGAGGCCGCCACCAGCCGACGCATCGGGCTTTTTTCTACGCGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGCGAGCCAGGTATT‑TCGAATTGCCGGGCCCGCTTTCCCGTTGTCATCCAGAAAGACCATTTATGCTTTCGGccggcaa > 2:439807/1‑244 (MQ=255) aaaTTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAAcc < 1:310667/251‑1 (MQ=255) gCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCCGATCTCATCCAGAAAGACAATTTTTGCTTCCGGCAGGGAACCGCTGGt > 1:55942/1‑251 (MQ=255) ccTGCACTTTATCTAACCTCAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGTCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACg < 1:551469/250‑1 (MQ=255) ccTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGGGCAAGGTATT‑AAGAATTGCCCGGCCCGCTTTCCAGGTCTCAt > 1:536667/1‑204 (MQ=255) ccTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCAt < 2:536667/204‑1 (MQ=255) cTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATCTAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCCAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAAAGATCCTCCCGAAAGACAAATTTTCCTTCCCGCCGGGAACCGCAGGTGAAAcatt > 2:636573/1‑248 (MQ=255) cTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAAGGATT‑AAGAATTTCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGGAACCGCTGGTTAAACGtt > 1:257157/1‑251 (MQ=255) cACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCAt < 2:684464/251‑1 (MQ=255) cTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCCGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATa > 1:40594/1‑250 (MQ=255) aTCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAgcgc < 1:73119/250‑1 (MQ=255) cTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTTCCGGGCCCGCTTTCCAGATCTCCTCCAGAAAGACAATTTTTGCTTCCCGCAGGGAACCGCTGGTTTAACGGTCATAGCGcccc > 2:428143/1‑250 (MQ=255) cTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCCGGCCCGCTTTCCAGATCTCATCCCGGAAGACAATTTCTGCTTCCGGCAGGGAACCGCCGGGTAAACGTTCATAGCGcccc > 1:136216/1‑250 (MQ=255) tAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGccc < 1:9907/175‑1 (MQ=255) acaGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑TAAAATTGCCGGGCCCGCTTTCCCAATATCATCCAGAAAGAAAATTTCTGCTTCCGGGCGGTAACCGCCGGTTAAACGGTCATAGCGCCCTTCATCt > 2:662704/1‑251 (MQ=255) aGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCttt < 1:660459/251‑1 (MQ=255) gACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCtttt < 1:428143/251‑1 (MQ=255) aaTCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTTCAGATCTCATCCCGAAAAACAATTTCTGCTTCCGGCAGGTAACCGCCGGTTAAAAGTTCATAGCGCCCTTCATCTTTTAgcg > 1:505969/1‑251 (MQ=255) cATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTTAGCAAGGTATTTAAAATTTGCCGG‑CCCGCTTTCCCGATCTCATACCGAAAGACAATTTCTGCCTTCGGCAGGTAAACGCTGGTTTACAGTTCATAACGCCCTTCATCTTTTatgggcaga > 1:577397/1‑242 (MQ=255) atatAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAggg < 2:174102/251‑1 (MQ=255) ataACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAgggg < 2:46748/250‑1 (MQ=255) aCGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCa < 1:331740/251‑1 (MQ=255) cTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGAc < 2:599993/246‑1 (MQ=255) cTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGGAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGAc > 1:599993/1‑246 (MQ=255) gctgTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACttcttc < 2:626241/249‑1 (MQ=255) gCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGga < 2:358382/251‑1 (MQ=255) ccGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGaa < 2:257157/250‑1 (MQ=255) ggCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCAt < 2:393653/184‑1 (MQ=255) ggCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTTTGCTTCCGGCAGGGAACCGCTGGTTAAACGTTCAt > 1:393653/1‑184 (MQ=255) gCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCttt < 1:125758/199‑1 (MQ=255) gCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCgg < 1:105659/251‑1 (MQ=255) gCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGGCGGGCCCGCTTTCCAGATCTCATCCCGAAAGACAATTTCTGCTTTCGGCCGGTAACCGCTGGTTAAAAGTTCATAGCGCCCTTTATCttt > 2:125758/1‑199 (MQ=255) cAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCggg < 2:237490/251‑1 (MQ=255) aGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGt < 1:619406/251‑1 (MQ=255) gTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGCGAGCAAGGTATT‑CAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAAGGGACCAAAAACTTCTTCCGGCGGGGAGAAGCGGGtcata > 2:239759/1‑249 (MQ=255) ggAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGcc < 1:538795/100‑1 (MQ=255) ggCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTc < 2:169325/168‑1 (MQ=255) ggCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGGAAACGCTGGGTAAACGTTc > 1:169325/1‑168 (MQ=255) cgccACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCaa < 2:40594/251‑1 (MQ=255) accaGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAAAATTGTCGGGCCCGCTTTCCAGCTCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGGAACCGCTGGTTAAACGTTCATAGCGCCCCTCATCCTTTAGCGCCTGAATAGAAAAGGGACCAAAAACTTCTTCCGGCGTGGGGCAGCGGGGCATCAGATATTCAAAcgc > 1:205348/1‑251 (MQ=255) cGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCtt < 1:459637/124‑1 (MQ=255) cGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCtt > 2:459637/1‑124 (MQ=255) gggATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTTAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGGATAGAAAGGGGACCAAAAACTTCTTCCGGCGCGGAGAAGCGGGTCATCAGAAATTCAAACGCGCGGGCATTTTGaa > 1:103493/1‑250 (MQ=255) aTTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAgg < 1:445299/250‑1 (MQ=255) aTTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCCGAAAGACAAATTCTGCTTCCGGCAGGTAACCGCTGGGTAAACGTTTATAGAGCACTTCAACTTTTAGCGCCTGAATAGAAAGGGGGACAAAAACTTCTTTCGGGGGGGGGAAGGGGGGCAGCAGAAAATCAAAAGCGCGGGCAAACTGAAAggg > 1:203758/1‑250 (MQ=255) gtgtGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTcc < 1:692973/106‑1 (MQ=255) aCCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGGAAGGGATT‑AATCATTGCCGGGCCCGCTTTCCAGATTCCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAAACGCTGGGTAAAAGTTTATAGGGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGAACAAAAACTTCTTCCGGCGTGGAGAAGCGGGGCATCAGATATTCAAAACCGCGGGGATTTTGAAAGGCGAATTTTAAGCGCCggg > 1:697776/1‑251 (MQ=255) ccGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGc < 1:662704/251‑1 (MQ=255) gTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCCGAAAAACAATTTCTGCTTCCGGCAGGTAACCGCTGGGTAAACGTTCATAGCGCCCTTCCTCTTTTAGCGCCTGAATAGAAAAGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGGCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCgg > 2:163257/1‑250 (MQ=255) gCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCa < 1:264902/251‑1 (MQ=255) ggAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTTCAGATCTCCTCCAGAAAGACAATTTCTGCTTCCGGCACGTAACCGCTGGGTAAACGGTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGGCCAAAAACTTCTTCCCGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGGGATCaa > 1:389266/1‑250 (MQ=255) aaCTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTTTGCTTTCGGCAGGTAACCGCTGGTTAAAAGTTCATAGCGCCCTTCATCTTTTAGAGCCTGAATAGAAAGGGGACCAAAAACTTTTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAAAGCGCGGGCATTCTGAAAGGCGAAATTTAAGCGCCGGGCGATCaaaat > 1:357447/1‑249 (MQ=255) aaCTGGCGCTCGTTAATGGCGGTGAGCAAGGGATT‑AAGAATTGCCCGGCCCGCCTTCCAGATCTCATCCAGAAAAACAATTTCTGCTTCCGGCAGGGAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGGCATCAGATATTCAAACGCGCGGGCCTTCTGAAAGGCGAATTTTAAGCGCCCGGGGAACAAAcc > 2:237541/1‑250 (MQ=255) cGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCGTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAAt < 2:213916/250‑1 (MQ=255) cGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCACGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAAt < 2:229517/250‑1 (MQ=255) tAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATAcc < 1:163257/250‑1 (MQ=255) aaTGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATc < 1:489809/117‑1 (MQ=255) aTGGCGGTGAGCAAGGGATT‑AAGAATTGACGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGAAATACCTgg > 1:570585/1‑251 (MQ=255) ggCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCg < 2:55942/251‑1 (MQ=255) ggCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCg < 1:239759/251‑1 (MQ=255) ggAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCGGGCCa < 2:5128/250‑1 (MQ=255) | ACCTGCAAGGCATCAGGAACCGGATTGTCGTTTTCATCCTGTTGACTGGTCAGCATGGAGCGGAAATTCGCTTTATCCTGCACTTTATCTAACCACAGACGAATCAGCATGCGGTCATATAACGCTTCCAGACTGCTGTCTGCTTCCGGCAGCTCGTTGGAGGCCGCCACCAGCAGACGCATCGGGATTTTTTCTACGTGTGCACCGTTGCGGAACTGGCGCTCGTTAATGGCGGTGAGCAAGGTATT‑AAGAATTGCCGGGCCCGCTTTCCAGATCTCATCCAGAAAGACAATTTCTGCTTCCGGCAGGTAACCGCTGGTTAAACGTTCATAGCGCCCTTCATCTTTTAGCGCCTGAATAGAAAGGGGACCAAAAACTTCTTCCGGCGTGGAGAAGCGGGTCATCAGATATTCAAACGCGCGGGCATTCTGAAAGGCGAATTTTAAGCGCCGGGCGATCAAACTTTTGGCAATACCTGGCGGGCCA > NC_000913/3930474‑3930959 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |