| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,664,896 | 0 | T | G | 36.7% | 155.6 / 15.5 | 80 | G169G (GGT→GGG) | yfhR | putative peptidase |
| Reads supporting (aligned to +/- strand): ref base T (9/41); new base G (28/1); total (38/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.58e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCGGAAATATGTCCGCCCACTGGCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATCCCG > NC_000913/2664651‑2665145 | gCCGGAAATATGTCCGCCCACTGGCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATc < 2:611977/250‑1 (MQ=255) gCCCACTGGCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGc < 2:130122/251‑1 (MQ=255) cACTGGCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGGTGGTTTTTGTTGGGGTGATGGGGAAGGCATACGGGCggg > 1:247693/1‑250 (MQ=255) cTGGCCGCTGGTCAGTTGGTTGCCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGGGGATATTCT‑GGGTGTTATTTGTCGGGGGGGTTGTGGAGGCATACGTGCGGTgg > 2:474420/1‑250 (MQ=255) ggctgCTGGTCAGTTGGTTACCCGAGCGTAATTTCACCGTTTTTATGTTTGATTATCGCGGGTTTGGGCAATGAAAAGGCACGCCGTCCCCGGCCGAATTGCTGGACGATACGCAAAGAGCCATCACTGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTATTCGGGCAGCGTATTGGCGGAGCGGCTATTCTTGGAGGTT‑TTTGTCGGGGGGAGAGTGAAGGGATTCGTGCGGGGATc > 2:338142/5‑251 (MQ=255) ggCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTTTTTGGCGGGGGGGTTGTGAAGGCATAAGTGCGGGGATc > 1:98113/1‑251 (MQ=255) ggCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCACGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTTCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑TGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATc < 1:41614/251‑1 (MQ=255) gCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATcc < 1:224605/251‑1 (MQ=255) gCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATcc < 1:26502/251‑1 (MQ=255) cGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTc < 2:345872/251‑1 (MQ=255) cccGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTTCctc > 1:234014/1‑251 (MQ=255) aTTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGGGGTCGTGAAGGCATACGTGCGGGGGTTCCCGACTCCCCATTTGCCTCTTAttaaacc > 2:21274/1‑245 (MQ=255) aTTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGGTTTTGGTCGGGGGGGTCGTGCAGGCATACGGGCGGGGATCCTCGACTCCACATTTGCCTCTTTTGCAAcc > 1:61186/1‑251 (MQ=255) cAACGTTTTTATGTTTGGTTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTTT‑GGGTGTTATTTGTCGGGGGGGTCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTTTGCAACCATcc > 1:410081/1‑250 (MQ=255) cAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATc < 2:595167/250‑1 (MQ=255) cAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑g < 1:474420/251‑1 (MQ=255) aCGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGGGATCGTGAAAGCCTAAGCGGGGGGATCCTCGACTCCCCATTTTCCTCTTATTCGCCCATC‑Gcc > 1:288848/1‑251 (MQ=255) tATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑Gccaaccaa < 2:98113/250‑1 (MQ=255) tttGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGAAATTCT‑GGATGTTATTTGTCGGGGGGGTCGTGGAGGCATACGGGCGGGGATCCTCGACTCCACATTTTCCTCTTATTTAACCATC‑Gcccaccacacaa > 2:173077/1‑245 (MQ=255) gATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATcc < 1:261877/250‑1 (MQ=255) tATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTTCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATAATTT‑GGGTGTTATTGGTCGGGGGGATCGTGAAGGGATACGAGGGGTGGTCCTCCAACCCACCTTTTCCTCTTTTTCAACCATC‑GCCACCCAAATGaacacctg > 2:667660/1‑244 (MQ=255) cgGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGATATTCT‑GGATGTTTTTTGTCGGGGGGGTCGTGAAGGCATACGTGCGGTGATCCTCGAATCCACATTTTCCTCTTTTGCCACCATC‑CCCCAACAAAAGATCCCCCGCAggg > 2:541088/1‑249 (MQ=255) cgGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTg < 1:234591/251‑1 (MQ=255) ggTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGc < 2:81449/251‑1 (MQ=255) gTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGACCCCCGGCAGTGGCt < 1:460412/251‑1 (MQ=255) tttGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGGCGGGGGGATCGTGAAGGCATACGTGCGGGGATCCTCGACTCCACATTTTCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGCCAGTGGCtc > 2:564159/1‑250 (MQ=255) tGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGGGGATATTTT‑GGGTGTTATTTTTCGGGGGGGTTGTGATCGCATACGTGTGGGGATTCTCGACTCCACATTTTCCTCTTTTTCCACCATCTCCCAACCAA‑TGATccccccccggggccaat > 2:46027/1‑238 (MQ=255) aaaTCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCtacttac < 2:410081/250‑1 (MQ=255) aTCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTa < 1:527439/204‑1 (MQ=255) aaGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGGGAATATTCT‑GGATGTTATTTGGCGGGGGGGTCGGGAAGGGATACGTGCGGGGATCCTCGACTCCACATTTTGCTCTTTTTCAACCATC‑GCCCACCAAACGATTCCCGGCAGGGGCCACTTTCTtgatga > 2:361236/1‑250 (MQ=255) aGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTCTTGGTCGGGGGGAGCGTGAAGGCATATGGGCGGTGATCCTCGACTCCACCTTTGCCTCTTATGCCAACATC‑GCCCACCCAATGATCCCCCGCAGCGGCTCCTTAATTGATgagg > 1:595648/1‑250 (MQ=255) ggCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGATATTCT‑TGACGTTATTGGTCGGGGGGATCGGGAAGGCATACGTGCGGGGATCCTCGACTCCACATTTGCCTCTTATGCAACCACC‑GCCAACCCAACCATCCCCCGCCGTGGCtcatttcctgcttgatg > 2:162290/1‑235 (MQ=255) aGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGATATTCT‑GGGTGTTTTTGGTCGGGGGGGTCGTGGAGGCATACGGGCGGGGGTTCTCGACTCCACATTTGTCTCTTTTGCAAACATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGagaggttaaacggggg > 2:140453/1‑238 (MQ=255) aGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTTTTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCCCATTTGCCTCTTATGCAACCATC‑GCCCACCAAATGATc > 1:565852/1‑209 (MQ=255) aGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATc < 2:565852/209‑1 (MQ=255) aGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGGGGTCGTGAAGGCATACGTGCGGGGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCCACCAAATGATCCCCGGCAGGGGCTACTTTCTTGATGAGAGTTACAgcggcgg > 2:49059/1‑249 (MQ=255) gCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGATATTTTTGGA‑GGTATTTGTCGGGGGGATCGTGGAGGCATAAGGGCGGTGATCCTTGACTCCCCATTTGCCCCTTATGCAACCAAC‑GCCCACCAAATGATCCCCGGCAGTGGCTCCTTACTTTATGAAAGTTACAACGGCGAAAATTAT‑ATCg > 2:597548/1‑251 (MQ=255) aCGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGACCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGc < 1:580009/251‑1 (MQ=255) cAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAACCCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGccc < 2:465055/251‑1 (MQ=255) aaaGTGCCATCAATGTGGAGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGATTTTCT‑TGATGTTATTGGTCGGGGGGATCCTGAAGGGATACGTGCGGTGGTCCCCCCCGCCACAATTGCCTCTTTTACAACCCTC‑GCCACCCCAATTACCCCCCGCAGGGGCTACTTTCTTGCTGTGGGTTACACCGGCGAAAACTAT‑ATCGCCaaagggagcccc > 1:3057/1‑240 (MQ=255) gCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATccc < 1:140453/251‑1 (MQ=255) gCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATcc < 1:648044/250‑1 (MQ=255) cATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGc < 1:361236/251‑1 (MQ=255) aTCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCATCCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCTGATCCCGCt < 1:479095/251‑1 (MQ=255) aTCAATGTGGAGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGGGCTGTTCGGGCAGAGTATTGGCGGGGGGGCTATTCTTGGA‑GTTTTTGGTACGGGAGATCGTGATGGCATACGTGGGGTGAGCCTCCACTCCCCATTTGCCTCTTATTCAACCCTC‑TCCAACCAAATGAACCCCGGCCGTGGCTACCTACCTTATGAGAGTTACATCCGCGAAAAATATTAT‑TCCAGCGTCACCCCGATccccct > 1:235586/1‑248 (MQ=255) cAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGGTGTTATTGGGCGGGGGGGTCGGGGAGGAATACGTGCGGTGATCCCCGACTCCACATTTTCCTCTTTTGCAACCAAC‑GCCAACCAAATGATCCCCGGCAGTGGGTACTTACTTGATTAGAGGTACAACCGCGACAATTAT‑ATCGCCAACGGCAACCCGATCCCGcctt > 2:624645/1‑248 (MQ=255) aaTGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGACCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCtttt < 2:288848/251‑1 (MQ=255) ggtgCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGATATTTT‑GGGTGTTATTGGGCGGGGGGGTCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACCTTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCCGCAGTGGGTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGGCCGCCCGATCCCGCCTTTtctcc > 1:577923/1‑250 (MQ=255) gcgcCATCGCAGTGATGTAACCCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTc < 1:404968/251‑1 (MQ=255) cATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAAAATTCT‑GGGTGTTATTTGTCGGGGGGATCGTGGAGGCCTACGTGCGGGGATCCTCGACTCCCCATTTGCCTCTTTTGCAACCCTC‑CCCAACCAAAAGACCCCCCGCAGTGGCTACTTACTTGATGAGAGTTACAACCGCGAAAATTAT‑ATCGCCCGCGTCCACCCGAACCCCCTTTTACTCATTCCCgg > 2:279606/1‑251 (MQ=255) agcGCAGTGATGTAAACCCACAACGTCTGGGGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGTCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGt < 2:235586/249‑1 (MQ=255) cGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCTGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTa < 2:234014/250‑1 (MQ=255) gTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGCATATTCT‑GGGTGTTTTTGGCCCGGGGGATCGTGAAGGCAAACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCCCCAGCGTCCGCCCCATCCCCCTTTTACTCATTCACGGGaaaacc > 2:193215/1‑248 (MQ=255) gTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATc < 1:46027/250‑1 (MQ=255) aCCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGTGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGtn < 2:305114/251‑2 (MQ=255) aCCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGCATATTCT‑GGATGTTATTGGTCGGGGGGATCGGGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTTTGCaa > 1:465951/1‑126 (MQ=255) aCCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCaa < 2:465951/126‑1 (MQ=255) aCCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGtt < 1:21274/251‑1 (MQ=255) ccACAACGGCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTAt < 2:61186/251‑1 (MQ=255) caACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGTCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCATCCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAACGGCTAAAATTAT‑ATCGCCAGCGTCATCCCGATCCCCCTTTTACTCATTCCCGGTAAAGCTGATCACGTTATccc < 2:679377/251‑1 (MQ=255) gTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATgg < 1:564159/251‑1 (MQ=255) ggTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGgcagc < 1:624645/251‑1 (MQ=255) gCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑Gccaacca < 2:284820/123‑1 (MQ=255) gCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGGGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑Gccaacca > 1:284820/1‑123 (MQ=255) gcGGGCAGAGTATTGGCGGGGCGAATAGGCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATACACGGTAAAGCTGATCCCGTTATCCCATAGCAGCACAGCGaa < 2:49992/250‑1 (MQ=255) gggCAGAGTATTGGCGGGGCGAATATTTT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGGTCCTCGACTCCACATTTTCCTCTTATGCAACCATC‑GCCCACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGGCAGCCCCATCCCGCTTTTTCTCATTTACGGTAAAACTGGTCACGGTATCCCATTGCAGCACAGCggaa > 1:375786/1‑247 (MQ=255) gggCAGAGTATTGGCGGGGCGAATATTCT‑GGGTGTTATTGGTCGGGGGGGTCGGGAAGGCATACGTGCGGGGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTTATGAGAGTTACAACGGCGGAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCCCTTTTTCTCATTCACGGTAAAGCTGATCACGTTATACCATGGCAGcaccacgaaa > 1:463127/1‑243 (MQ=255) cAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGcaca < 1:529005/241‑1 (MQ=255) aTTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAg < 1:49059/251‑1 (MQ=255) tGGCGGGGCGAATATTCT‑GGATGTTATTGGGCGTGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGACCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGc < 2:3057/250‑1 (MQ=255) gCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGCAGGCATACGTGCGGTGATCCTCGACTCCACGTTTGCCTCTTATGCAACAATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCCGCCCGATCCCGCTTTTACTCATTCCCGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGCAAAGTTGTATAGCCTTGCaa > 2:701217/1‑250 (MQ=255) gAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCaaa > 2:234216/1‑249 (MQ=255) ggaagTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCaa < 1:162290/244‑1 (MQ=255) ggATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCATATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAAc < 1:597548/251‑1 (MQ=255) gTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGtt < 1:173077/251‑1 (MQ=255) cGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAAt > 2:60397/1‑251 (MQ=255) ggggTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATc > 1:31901/1‑251 (MQ=255) ggTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATccc > 2:213531/1‑251 (MQ=255) ggTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATccc > 2:296442/1‑251 (MQ=255) gTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATCCCg > 1:288105/1‑251 (MQ=255) | GCCGGAAATATGTCCGCCCACTGGCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCT‑GGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATC‑GCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTAT‑ATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATCCCG > NC_000913/2664651‑2665145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |